RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 GLDCP23378 1020 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 MAGEA9P43362 315 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 CXCL12P48061 93 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 FNTBP49356 437 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 TAS2R40P59535 323 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 MRPS21P82921 87 aaKnown RBP7.2□□□□□ -1.26
SMG6-209ENST00000571442 SLC25A11Q02978 314 aaKnown RBP7.2□□□□□ -1.26
SMG6-209ENST00000571442 SCAPQ12770 1279 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 SEMA3BQ13214 749 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 ENPP2Q13822 863 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 DMC1Q14565 340 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 ZNF234Q14588 700 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 FBXO43Q4G163 708 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 PITRM1Q5JRX3 1037 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 MBLAC2Q68D91 279 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 HEATR6Q6AI08 1181 aaKnown RBP7.2□□□□□ -1.26
SMG6-209ENST00000571442 SCYL2Q6P3W7 929 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 MAMSTRQ6ZN01 415 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 SYT13Q7L8C5 426 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 ANKS1BQ7Z6G8 1248 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 TFAP2DQ7Z6R9 452 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 NLRP14Q86W24 1093 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 FRMD1Q8N878 549 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 ZNF513Q8N8E2 541 aaPredicted RBP7.2□□□□□ -1.26
SMG6-209ENST00000571442 NETO2Q8NC67 525 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 ACRBPQ8NEB7 543 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 ZNF564Q8TBZ8 553 aaPredicted RBP7.2□□□□□ -1.26
SMG6-209ENST00000571442 FNIP1Q8TF40 1166 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 NTAN1Q96AB6 310 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 MRGPRX3Q96LB0 322 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 C1orf74Q96LT6 269 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 HAPLN3Q96S86 360 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 KCTD15Q96SI1 283 aaPredicted RBP7.2□□□□□ -1.26
SMG6-209ENST00000571442 PSMB7Q99436 277 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 SNRNP25Q9BV90 132 aaKnown RBP7.2□□□□□ -1.26
SMG6-209ENST00000571442 SLC2A11Q9BYW1 496 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 OSBPL2Q9H1P3 480 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 NOL6Q9H6R4 1146 aaKnown RBP7.2□□□□□ -1.26
SMG6-209ENST00000571442 ELOVL2Q9NXB9 296 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 THAP10Q9P2Z0 257 aaPredicted RBP7.2□□□□□ -1.26
SMG6-209ENST00000571442 SALL4Q9UJQ4 1053 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 ANAPC7Q9UJX3 599 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 MMP17Q9ULZ9 603 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 MFHAS1Q9Y4C4 1052 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 ACTL7AQ9Y615 435 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 WDR87Q6ZQQ6 2873 aa7.2□□□□□ -1.26
SMG6-209ENST00000571442 A0A1B0GVM2 712 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 PRR23AA6NEV1 266 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 TCAF2A6NFQ2 919 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 H0Y626 953 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 RNF103O00237 685 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 SNAP91O60641 907 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 LCA5LO95447 670 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 TPM1P09493 284 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 H2AFZP0C0S5 128 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 TMEM253P0C7T8 217 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 VAV1P15498 845 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 STK19P49842 368 aaPredicted RBP7.19□□□□□ -1.26
SMG6-209ENST00000571442 CCR3P51677 355 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 CDH4P55283 916 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 NRG1Q02297 640 aaPredicted RBP7.19□□□□□ -1.26
SMG6-209ENST00000571442 CDH18Q13634 790 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 CRY1Q16526 586 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 SMTNL2Q2TAL5 461 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 PLEKHG6Q3KR16 790 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 ATP13A4Q4VNC1 1196 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 KCNT1Q5JUK3 1230 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 PPP1R2P3Q6NXS1 205 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 H2AFVQ71UI9 128 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 SND1Q7KZF4 910 aaKnown RBP eCLIP7.19□□□□□ -1.26
SMG6-209ENST00000571442 SLFN11Q7Z7L1 901 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 VPS36Q86VN1 386 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 TP53INP2Q8IXH6 220 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 MDGA1Q8NFP4 955 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 OR7D4Q8NG98 312 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 SLC35G2Q8TBE7 412 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 TTC17Q96AE7 1141 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 TRIM11Q96F44 468 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 CCDC42Q96M95 316 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 PANX2Q96RD6 677 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 GABRG3Q99928 467 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 DDX50Q9BQ39 737 aaKnown RBP7.19□□□□□ -1.26
SMG6-209ENST00000571442 IRX2Q9BZI1 471 aaPredicted RBP7.19□□□□□ -1.26
SMG6-209ENST00000571442 CIPCQ9C0C6 399 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 KLC2Q9H0B6 622 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 TMEM245Q9H330 911 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 GOLPH3Q9H4A6 298 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 DEF6Q9H4E7 631 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 ZNHIT6Q9NWK9 470 aaKnown RBP7.19□□□□□ -1.26
SMG6-209ENST00000571442 OR12D3Q9UGF7 316 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 SLC12A6Q9UHW9 1150 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 SLCO3A1Q9UIG8 710 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 FBXO4Q9UKT5 387 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 USP18Q9UMW8 372 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 INVSQ9Y283 1065 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 TBC1D30Q9Y2I9 924 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 HYOU1Q9Y4L1 999 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 STON1Q9Y6Q2 735 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 SCINQ9Y6U3 715 aa7.19□□□□□ -1.26
SMG6-209ENST00000571442 ABCA7Q8IZY2 2146 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms