RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MLYCDO95822 493 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ALDH1A1P00352 501 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CELA3AP09093 270 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 PLA2G4BP0C869 781 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 GAAP10253 952 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 PRKAR1AP10644 381 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 PABPC1P11940 636 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 C6P13671 934 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 TYMPP19971 482 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CCNA2P20248 432 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ENDOUP21128 410 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 GALP22466 123 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 TBXAS1P24557 533 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 ACSL1P33121 698 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 PTGS2P35354 604 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ARL3P36405 182 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 SERPINF1P36955 418 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 GP5P40197 560 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ETV3P41162 512 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 GCLCP48506 637 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 CPT1AP50416 773 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 SCNN1GP51170 649 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CCR9P51686 369 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 LUMP51884 338 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 ZNF143P52747 638 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 WNT7BP56706 349 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CARD18P57730 90 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 SSTP61278 116 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 NOP14P78316 857 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 CCZ1BP86790 482 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CCZ1P86791 482 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 DSG1Q02413 1049 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 UBE3AQ05086 875 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 PRKCZQ05513 592 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 RNASELQ05823 741 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 PAK1Q13153 545 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ITGB3BPQ13352 177 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 ORC2Q13416 577 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 CUL1Q13616 776 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 PMS2P11Q13670 270 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 COTL1Q14019 142 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 BAATQ14032 418 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 CYLC2Q14093 348 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 HNRNPDQ14103 355 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 PGM5Q15124 567 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 MAPRE2Q15555 327 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 UGCGQ16739 394 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 TIGD6Q17RP2 521 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CYP27C1Q4G0S4 372 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 FAM26FQ5R3K3 315 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 RNASEH2BQ5TBB1 312 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 CYP4A22Q5TCH4 519 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CDKAL1Q5VV42 579 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CES4AQ5XG92 561 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 KRT79Q5XKE5 535 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 SLC22A25Q6T423 547 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CLEC2AQ6UVW9 174 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 MOXD1Q6UVY6 613 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 RNF207Q6ZRF8 634 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ARHGAP36Q6ZRI8 547 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 OTOP1Q7RTM1 612 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 TRMT1LQ7Z2T5 733 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 MAMDC2Q7Z304 686 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 SZRD1Q7Z422 152 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 TAF8Q7Z7C8 310 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 MOGAT3Q86VF5 341 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 GPBP1Q86WP2 473 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 TREML1Q86YW5 311 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 IRF2BP1Q8IU81 584 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 RIOX2Q8IUF8 465 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 GRAMD2AQ8IUY3 354 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 KSR1Q8IVT5 923 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 C12orf56Q8IXR9 622 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 SPARTQ8N0X7 666 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 LSMEM2Q8N112 164 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ADSSL1Q8N142 457 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 NXPE1Q8N323 547 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CELF5Q8N6W0 485 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 MRPL43Q8N983 215 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 MLKLQ8NB16 471 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CCDC112Q8NEF3 446 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 NPLOC4Q8TAT6 608 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 TRPC4APQ8TEL6 797 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 DDI1Q8WTU0 396 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 TMEM40Q8WWA1 233 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 SLC5A5Q92911 643 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 EFHD2Q96C19 240 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 FAM120BQ96EK7 910 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 MVB12AQ96EY5 273 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ZNF764Q96H86 408 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 TMEM169Q96HH4 297 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 MAML3Q96JK9 1138 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 MAGEB10Q96LZ2 347 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 RUFY1Q96T51 708 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 SH2D3AQ9BRG2 576 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 MXRA8Q9BRK3 442 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 OXCT2Q9BYC2 517 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 STK33Q9BYT3 514 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 TRIM2Q9C040 744 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ADAM19Q9H013 955 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms