RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TSPAN3O60637 253 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 NEBLO76041 1014 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 NFATC1O95644 943 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 PYGMP11217 842 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 LAMP2P13473 410 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 PRLRP16471 622 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 TGM2P21980 687 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 WEE1P30291 646 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 PTPN7P35236 360 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 VIPR2P41587 438 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 CDKN2BP42772 138 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 PEX5P50542 639 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 NRG1Q02297 640 aaPredicted RBP6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 EIF4EBP2Q13542 120 aaPredicted RBP6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 AUHQ13825 339 aaKnown RBP6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 PDGFRLQ15198 375 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 ANO4Q32M45 955 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 LEXMQ3ZCV2 418 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 ATP13A4Q4VNC1 1196 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 MPPE1Q53F39 396 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 ANKRD20A8PQ5CZ79 823 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 C6orf118Q5T5N4 469 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 DCAF12L1Q5VU92 463 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 NADSYN1Q6IA69 706 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 RFWD3Q6PCD5 774 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 MFSD7Q6UXD7 560 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 Q6ZNB5 142 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 TPGS1Q6ZTW0 290 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 HTR3DQ70Z44 454 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 BZW1Q7L1Q6 419 aaKnown RBP6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 TFAP2DQ7Z6R9 452 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 MFN1Q8IWA4 741 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 BBS7Q8IWZ6 715 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 CPXM2Q8N436 756 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 CPA6Q8N4T0 437 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 ATPAF2Q8N5M1 289 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 KIAA1958Q8N8K9 716 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 RTL3Q8N8U3 475 aaKnown RBP6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 FAM174AQ8TBP5 190 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 DDI1Q8WTU0 396 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 OSCP1Q8WVF1 389 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 SUSD6Q92537 303 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 RAPGEF5Q92565 580 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 P3H4Q92791 437 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 GLMNQ92990 594 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 BHMTQ93088 406 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 AZIN2Q96A70 460 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 HAUS1Q96CS2 278 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 MRGPRX2Q96LB1 330 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 C1orf74Q96LT6 269 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 ZSWIM3Q96MP5 696 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 MYADMQ96S97 322 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 KXD1Q9BQD3 176 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 PHF7Q9BWX1 381 aaPredicted RBP6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 HEMGNQ9BXL5 484 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 ARHGEF4Q9NR80 690 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 DUS2Q9NX74 493 aaKnown RBP6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 THEGQ9P2T0 379 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 WNT6Q9Y6F9 365 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 PDE4DIPQ5VU43 2346 aa6.78□□□□□ -1.32
CTDNEP1-204ENST00000570484 LAMA3Q16787 3333 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 GOLGA6L7A0A1B0GV03 622 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 NEDD8-MDP1E9PL57 170 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAM72CH0Y354 149 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 H0Y626 953 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 APOC4-APOC2K7ER74 178 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 KRIT1O00522 736 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 NRG2O14511 850 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 TRDMT1O14717 391 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 PPP1R12AO14974 1030 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF185O15231 689 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 MFSD11O43934 449 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CST8O60676 142 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 RAMP2O60895 175 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 TBL1XO60907 577 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CLDN11O75508 207 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ECI2O75521 394 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF189O75820 626 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 APOC2P02655 101 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 KLKB1P03952 638 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 RHOCP08134 193 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CD48P09326 243 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ADH5P11766 374 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 KRT10P13645 584 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 RHOQP17081 205 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 PSMC3P17980 439 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 MX2P20592 715 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 OR1E1P30953 314 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 HOXC13P31276 330 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLC6A4P31645 630 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ETFBP38117 255 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 HCAR3P49019 387 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 MAPKAPK2P49137 400 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 MLLT6P55198 1093 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CDH4P55283 916 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 OXCT1P55809 520 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 AMPD2Q01433 879 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 SEMA3BQ13214 749 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF177Q13360 481 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms