RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GRIA4P48058 902 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 STK19P49842 368 aaPredicted RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CCT8P50990 548 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 C21orf59P57076 290 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 NUCB2P80303 420 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CETN1Q12798 172 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 KCNH2Q12809 1159 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 KCNJ12Q14500 433 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 STILQ15468 1287 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 TAF5Q15542 800 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 COL28A1Q2UY09 1125 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 HNRNPA1L2Q32P51 320 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 C9orf64Q5T6V5 341 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 DHRS13Q6UX07 377 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 DBX2Q6ZNG2 339 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 TMPRSS7Q7RTY8 843 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CHSY1Q86X52 802 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CCDC117Q8IWD4 279 aaPredicted RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 IGSF8Q969P0 613 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 AZIN2Q96A70 460 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 SLC39A13Q96H72 371 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 SERPINB11Q96P15 392 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CDC6Q99741 560 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 OMDQ99983 421 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CRACR2AQ9BSW2 395 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 SRRTQ9BXP5 876 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 INTS2Q9H0H0 1204 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 FBRSQ9HAH7 460 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 UBE2TQ9NPD8 197 aaPredicted RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 AASDHPPTQ9NRN7 309 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 TJP2Q9UDY2 1190 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CYTH4Q9UIA0 394 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 HOOK1Q9UJC3 728 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 TLR6Q9Y2C9 796 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 GPSM3Q9Y4H4 160 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 PCDHGB2Q9Y5G2 931 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 DOCK9Q9BZ29 2069 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 ADAMTS20P59510 1910 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 CELSR3Q9NYQ7 3312 aa8.91□□□□□ -0.98
CTDNEP1-203ENST00000570385 PLXNA2O75051 1894 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 A0A1W2PPC4 97 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 FAM170AA1A519 330 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 TRABD2BA6NFA1 517 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 PMM2O15305 246 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 THAP12O43422 761 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 GRAP2O75791 330 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 TRUB2O95900 331 aaKnown RBP8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 IL1BP01584 269 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 APOEP02649 317 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 AFPP02771 609 aaKnown RBP8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 ASLP04424 464 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 PDGFRAP16234 1089 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 TACR2P21452 398 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 MZF1P28698 734 aaPredicted RBP8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 GGCXP38435 758 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 USP8P40818 1118 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 GRK6P43250 576 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 METAP1P53582 386 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 RACK1P63244 317 aaKnown RBP8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 ECT2LQ008S8 904 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 APBA1Q02410 837 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 GCNT1Q02742 428 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 CYP4F3Q08477 520 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 POM121L1PQ3SYA9 428 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 RNF219Q5W0B1 726 aaPredicted RBP8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 USP30Q70CQ3 517 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 TRIM59Q8IWR1 403 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 AADATQ8N5Z0 425 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 OR14C36Q8NHC7 312 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 TIGD1Q96MW7 591 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 FAM129BQ96TA1 746 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 ACE2Q9BYF1 805 aaPredicted RBP8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 OSGEPQ9NPF4 335 aa8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 KIAA1522Q9P206 1035 aaPredicted RBP8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 ARID1BQ8NFD5 2236 aaPredicted RBP8.9□□□□□ -0.98
CTDNEP1-203ENST00000570385 WDFY3Q8IZQ1 3526 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 EDDM13A0A1B0GTR0 161 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 BICDL2A1A5D9 508 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 LRRC72A6NJI9 287 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 F5H5T6 163 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 VILLO15195 856 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 P4HA2O15460 535 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 SART1O43290 800 aaKnown RBP8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 TNFSF14O43557 240 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 BNIP3LO60238 219 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 PCDHGA12O60330 932 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 GADD45BO75293 160 aaPredicted RBP8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 MOCS3O95396 460 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 C7P10643 843 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 GNA15P30679 374 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 MAT2AP31153 395 aaKnown RBP8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 ACADSBP45954 432 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 IRAK1P51617 712 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 PPP2CBP62714 309 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 YWHAZP63104 245 aaKnown RBP8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 PPP2CAP67775 309 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 CENPCQ03188 943 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 DNAJC3Q13217 504 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms