RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 SLC6A3Q01959 620 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 ZNF177Q13360 481 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 KCNJ12Q14500 433 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 DRAP1Q14919 205 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 SUZ12Q15022 739 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 TRIP6Q15654 476 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 CST6Q15828 149 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 DPCR1Q3MIW9 517 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 ACCSLQ4AC99 568 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 USP30Q70CQ3 517 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 PIP4P1Q86T03 277 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 SLC47A2Q86VL8 602 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 ZDHHC17Q8IUH5 632 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 MMAAQ8IVH4 418 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 NAXDQ8IW45 347 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 APCDD1Q8J025 514 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 WDTC1Q8N5D0 677 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 SKA1Q96BD8 255 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 RPL10LQ96L21 214 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 SLC2A13Q96QE2 648 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 SCNM1Q9BWG6 230 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 SIK2Q9H0K1 926 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 RSPH9Q9H1X1 276 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 PABPC3Q9H361 631 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 SIX2Q9NPC8 291 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 PLCB1Q9NQ66 1216 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 TM7SF3Q9NS93 570 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 RRN3Q9NYV6 651 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 SLC25A13Q9UJS0 675 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 INTS6Q9UL03 887 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 PAXBP1Q9Y5B6 917 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 DCHS1Q96JQ0 3298 aa9.22□□□□□ -0.93
NPLOC4-204ENST00000570324 CNOT1A5YKK6 2376 aaKnown RBP9.21□□□□□ -0.93
NPLOC4-204ENST00000570324 A0A1B0GVT2 93 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 A0A1W2PP55 124 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 MID1O15344 667 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 DAB1O75553 588 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 ADH1BP00325 375 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 IL1BP01584 269 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 IGLV3-25P01717 112 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 ERBB2P04626 1255 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 PNMA6AP0CW24 399 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 CD59P13987 128 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 PDGFRAP16234 1089 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 EEF1GP26641 437 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 CD27P26842 260 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 SLC8A1P32418 973 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 CLCN1P35523 988 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 CTSOP43234 321 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 PSMD8P48556 350 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 NUMBP49757 651 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 SULT1E1P49888 294 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 C21orf59P57076 290 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 PITX1P78337 314 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 ZNF423Q2M1K9 1284 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 HLA-BQ31612 363 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 CT47A1Q5JQC4 288 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 FKBP15Q5T1M5 1219 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 FAM102AQ5T9C2 384 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 TAF3Q5VWG9 929 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 KIAA0895LQ68EN5 471 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 FBXL22Q6P050 247 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 UNQ6494/PRO21346Q6UXR6 183 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 LRRC31Q6UY01 552 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 SLC26A9Q7LBE3 791 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 DSG4Q86SJ6 1040 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 ERICH1Q86X53 443 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 CIR1Q86X95 450 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 FAM71AQ8IYT1 594 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 ANKRD20A12PQ8NF67 263 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 RHBDD1Q8TEB9 315 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 BIRC7Q96CA5 298 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 C18orf8Q96DM3 657 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 MYEOVQ96EZ4 313 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 LMLNQ96KR4 655 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 MRGPRX3Q96LB0 322 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 PCMTD1Q96MG8 357 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 CAMK1GQ96NX5 476 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 WDCPQ9H6R7 721 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 TM9SF3Q9HD45 589 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 SAMSN1Q9NSI8 373 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 SLCO3A1Q9UIG8 710 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 VPS28Q9UK41 221 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 VANGL2Q9ULK5 521 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 APOBEC2Q9Y235 224 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 PCDH15Q96QU1 1955 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 FRYLO94915 3013 aa9.21□□□□□ -0.94
NPLOC4-204ENST00000570324 ASCC3Q8N3C0 2202 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-204ENST00000570324 C1QTNF9BB2RNN3 333 aa9.2□□□□□ -0.94
NPLOC4-204ENST00000570324 GOLGA6L22H0YM25 854 aa9.2□□□□□ -0.94
NPLOC4-204ENST00000570324 GOLGA8SH3BPF8 625 aa9.2□□□□□ -0.94
NPLOC4-204ENST00000570324 HYAL3O43820 417 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-204ENST00000570324 BNIP3LO60238 219 aa9.2□□□□□ -0.94
NPLOC4-204ENST00000570324 PAGE1O75459 146 aa9.2□□□□□ -0.94
NPLOC4-204ENST00000570324 CLDN11O75508 207 aa9.2□□□□□ -0.94
NPLOC4-204ENST00000570324 KRT37O76014 449 aa9.2□□□□□ -0.94
NPLOC4-204ENST00000570324 TOP3BO95985 862 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms