RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 METAP1P53582 386 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 GALCP54803 685 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 ZNF528Q3MIS6 628 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 PITRM1Q5JRX3 1037 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 CCDC122Q5T0U0 273 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 RNF219Q5W0B1 726 aaPredicted RBP10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 SMYD5Q6GMV2 418 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 PRR23BQ6ZRT6 265 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 ANKS1BQ7Z6G8 1248 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 WDR5BQ86VZ2 330 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 TP53INP2Q8IXH6 220 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 TSTD1Q8NFU3 115 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 OR7D4Q8NG98 312 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 ATRIPQ8WXE1 791 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 SYN2Q92777 582 aaPredicted RBP10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 ZNF653Q96CK0 615 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 PSMB7Q99436 277 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 DNAJC7Q99615 494 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 PRRX2Q99811 253 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 MKRN2Q9H000 416 aaKnown RBP10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 KLC2Q9H0B6 622 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 PARD6AQ9NPB6 346 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 ARIH1Q9Y4X5 557 aaPredicted RBP10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 ABCA7Q8IZY2 2146 aa10.12□□□□□ -0.79
GTF3C1-212ENST00000570129 GON4LQ3T8J9 2241 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 ITIH6Q6UXX5 1313 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 SMAD6O43541 496 aaKnown RBP10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 GFRA3O60609 400 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 MFAP3LO75121 409 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 ATG13O75143 517 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 APBB3O95704 486 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 TGM1P22735 817 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 SDC4P31431 198 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 HNRNPH3P31942 346 aaKnown RBP10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 PTPN9P43378 593 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 ZNF143P52747 638 aaPredicted RBP10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 COPAP53621 1224 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 GSCP56915 257 aaPredicted RBP10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 SNX16P57768 344 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 ENPP2Q13822 863 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 MAP7D1Q3KQU3 841 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 C5orf22Q49AR2 442 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 ATP13A4Q4VNC1 1196 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 FNDC3BQ53EP0 1204 aaKnown RBP10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 SARM1Q6SZW1 724 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 LINGO4Q6UY18 593 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 LONP2Q86WA8 852 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 RASSF3Q86WH2 238 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 DRC7Q8IY82 874 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 TC2NQ8N9U0 490 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 OR8K1Q8NGG5 319 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 TTC17Q96AE7 1141 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 GABRG3Q99928 467 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 FEM1AQ9BSK4 669 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 SLC2A11Q9BYW1 496 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 TMEM245Q9H330 911 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 NOL6Q9H6R4 1146 aaKnown RBP10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 PRSS16Q9NQE7 514 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 SLC12A6Q9UHW9 1150 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 STAP1Q9ULZ2 295 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 ERVW-1Q9UQF0 538 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 PCDHGA2Q9Y5H1 932 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 SLCO1B1Q9Y6L6 691 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 KIAA1549LQ6ZVL6 1849 aa10.11□□□□□ -0.79
GTF3C1-212ENST00000570129 CFAP54Q96N23 3096 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 A0A0U1RQJ8 604 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 CBFA2T2O43439 604 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 LRIG2O94898 1065 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 CYP1A2P05177 515 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 EPHX1P07099 455 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 SLC2A3P11169 496 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 GZMAP12544 262 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 POLR2EP19388 210 aaKnown RBP10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 PSMA2P25787 234 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 MIPP30301 263 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 HOXA6P31267 233 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 CDH18Q13634 790 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 SIM2Q14190 667 aaPredicted RBP10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 PLEKHG6Q3KR16 790 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 EOGTQ5NDL2 527 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 BRMS1LQ5PSV4 323 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 MPP7Q5T2T1 576 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 MANEALQ5VSG8 457 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 RWDD4Q6NW29 188 aaKnown RBP10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 ALKBH5Q6P6C2 394 aaKnown RBP10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 DCUN1D2Q6PH85 259 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 ARMCX6Q7L4S7 300 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 ARCQ7LC44 396 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 FAM124AQ86V42 546 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 TMEFF1Q8IYR6 380 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 PGBD3Q8N328 593 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 MSANTD4Q8NCY6 345 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 NKD2Q969F2 451 aaPredicted RBP10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 MRGPRX1Q96LB2 322 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 KCTD15Q96SI1 283 aaPredicted RBP10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 FAM129BQ96TA1 746 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 CNPY3Q9BT09 278 aa10.1□□□□□ -0.79
GTF3C1-212ENST00000570129 TRIM62Q9BVG3 475 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms