RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 DUSP8Q13202 625 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SMAD4Q13485 552 aaKnown RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 COG2Q14746 738 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SEC23BQ15437 767 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SHHQ15465 462 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 MSMPQ1L6U9 139 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 CCDC92Q53HC0 331 aaPredicted RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 C9orf50Q5SZB4 431 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 MANEALQ5VSG8 457 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SLC23A3Q6PIS1 610 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SLC39A5Q6ZMH5 540 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 H1FNTQ75WM6 255 aaPredicted RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SYT13Q7L8C5 426 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 TTC30AQ86WT1 665 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SNX32Q86XE0 403 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 VSIG1Q86XK7 387 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 DIS3L2Q8IYB7 885 aaKnown RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 ADSSL1Q8N142 457 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 CHCHD4Q8N4Q1 142 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 FAM46DQ8NEK8 389 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 MAFAQ8NHW3 353 aaPredicted RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 ACER1Q8TDN7 264 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 CUL5Q93034 780 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 LPPQ93052 612 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 CEP95Q96GE4 821 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 APOPT1Q96IL0 206 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 CLIC6Q96NY7 704 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 YME1L1Q96TA2 773 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 CDX2Q99626 313 aaPredicted RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 RIOK1Q9BRS2 568 aaKnown RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 FUZQ9BT04 418 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 TTPALQ9BTX7 342 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 MOV10L1Q9BXT6 1211 aaKnown RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 ITPAQ9BY32 194 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SPATC1LQ9H0A9 340 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 KCNH6Q9H252 994 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SLC25A32Q9H2D1 315 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 MROH8Q9H579 483 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 RPAP3Q9H6T3 665 aaPredicted RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 BARX1Q9HBU1 254 aaPredicted RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 PRDM7Q9NQW5 492 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 DIAPH3Q9NSV4 1193 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 ARGLU1Q9NWB6 273 aaPredicted RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 PLA2G3Q9NZ20 509 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 FAM30AQ9NZY2 134 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 CEP72Q9P209 647 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 KCND3Q9UK17 655 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 HSF4Q9ULV5 492 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SMG5Q9UPR3 1016 aaKnown RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 CNTN6Q9UQ52 1028 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 YBX2Q9Y2T7 364 aaKnown RBP3.46□□□□□ -1.86
CNOT1-221ENST00000569924 SNX8Q9Y5X2 465 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 PSAT1Q9Y617 370 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 ROBO3Q96MS0 1386 aa3.46□□□□□ -1.86
CNOT1-221ENST00000569924 BDP1A6H8Y1 2624 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 VCANP13611 3396 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 A0A1W2PRG0 241 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 CXorf49A8MYA2 514 aaPredicted RBP3.45□□□□□ -1.86
CNOT1-221ENST00000569924 C1QTNF9BB2RNN3 333 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 J3KTA2 159 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 ABLIM1O14639 778 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 KLK10O43240 276 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 BCAR3O75815 825 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 PIAS2O75928 621 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 TSPAN9O75954 239 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 HAUS5O94927 633 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 SLC25A27O95847 323 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 AMHP03971 560 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 JUNP05412 331 aaKnown RBP3.45□□□□□ -1.86
CNOT1-221ENST00000569924 CLEC3BP05452 202 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 ARP10275 920 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 UBL4AP11441 157 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 FCER1AP12319 257 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 ALAS1P13196 640 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 LAMP2P13473 410 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 CPA1P15085 419 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 CASRP41180 1078 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 ETV4P43268 484 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 PLCD1P51178 756 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 KCNQ1P51787 676 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 PTTG1IPP53801 180 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 ITGA1P56199 1179 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 YBX1P67809 324 aaKnown RBP3.45□□□□□ -1.86
CNOT1-221ENST00000569924 RPP30P78346 268 aaKnown RBP3.45□□□□□ -1.86
CNOT1-221ENST00000569924 CHAF1BQ13112 559 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 MPP3Q13368 585 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 ADAM15Q13444 863 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 TOP3AQ13472 1001 aaPredicted RBP3.45□□□□□ -1.86
CNOT1-221ENST00000569924 CAMK1Q14012 370 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 RTP5Q14D33 572 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 PRICKLE4Q2TBC4 344 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 GALNTL6Q49A17 601 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 ADGRF1Q5T601 910 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 UTP14CQ5TAP6 766 aaKnown RBP3.45□□□□□ -1.86
CNOT1-221ENST00000569924 KIAA1614Q5VZ46 1190 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 ABLIM2Q6H8Q1 611 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 RPUSD3Q6P087 351 aaKnown RBP3.45□□□□□ -1.86
CNOT1-221ENST00000569924 ZNF529Q6P280 563 aa3.45□□□□□ -1.86
CNOT1-221ENST00000569924 INO80CQ6PI98 192 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms