RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 RNF40O75150 1001 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 CNTN5O94779 1100 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 DCNP07585 359 aaKnown RBP13.44□□□□□ -0.26
CNOT1-217ENST00000569263 RHOCP08134 193 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 KRT7P08729 469 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 CISD3P0C7P0 127 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 RARAP10276 462 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 CHRNB1P11230 501 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 TNNT1P13805 278 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 RHOQP17081 205 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 EPHB2P29323 1055 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 HLA-FP30511 346 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 CD70P32970 193 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 ARL4AP40617 200 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 MAGEA9P43362 315 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 TNFRSF4P43489 277 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 ZNF135P52742 658 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-217ENST00000569263 SEC13P55735 322 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 TAS2R40P59535 323 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 MESP2Q0VG99 397 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 LMAN2Q12907 356 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 KRT81Q14533 505 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 ALFQ53S48 1182 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 C6orf118Q5T5N4 469 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 C11orf63Q6NUN7 778 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 CYP4V2Q6ZWL3 525 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-217ENST00000569263 SYNPOQ8N3V7 929 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 TPCN2Q8NHX9 752 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 UCMAQ8WVF2 138 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 KCTD15Q96SI1 283 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-217ENST00000569263 CIPCQ9C0C6 399 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 CATSPERBQ9H7T0 1116 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 C11orf16Q9NQ32 467 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 TRIM10Q9UDY6 481 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 SALL4Q9UJQ4 1053 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 DUSP10Q9Y6W6 482 aa13.44□□□□□ -0.26
CNOT1-217ENST00000569263 PRRT4C9JH25 899 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 FGF10O15520 208 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-217ENST00000569263 POLR2EP19388 210 aaKnown RBP13.43□□□□□ -0.26
CNOT1-217ENST00000569263 COMTP21964 271 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 OR1E1P30953 314 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 CSKP41240 450 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 RPS9P46781 194 aaKnown RBP13.43□□□□□ -0.26
CNOT1-217ENST00000569263 MAPKAPK2P49137 400 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 CDH6P55285 790 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 SEMA3BQ13214 749 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 EIF4HQ15056 248 aaKnown RBP13.43□□□□□ -0.26
CNOT1-217ENST00000569263 DPYSL2Q16555 572 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 GEN1Q17RS7 908 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 ODF2Q5BJF6 829 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 FSCBQ5H9T9 825 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 TXNRD3NBQ6F5E7 133 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 CXorf57Q6NSI4 855 aaKnown RBP13.43□□□□□ -0.26
CNOT1-217ENST00000569263 POLNQ7Z5Q5 900 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 SFTPA1Q8IWL2 248 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 RHOT1Q8IXI2 618 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 ZNF687Q8N1G0 1237 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.43□□□□□ -0.26
CNOT1-217ENST00000569263 EZH1Q92800 747 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-217ENST00000569263 PPP1R9BQ96SB3 815 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 MUC3BQ9H195 1237 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 KCNF1Q9H3M0 494 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 GOLPH3Q9H4A6 298 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 RETREG1Q9H6L5 497 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 TMEM248Q9NWD8 314 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 HYOU1Q9Y4L1 999 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 ATG2BQ96BY7 2078 aa13.43□□□□□ -0.26
CNOT1-217ENST00000569263 A0A0A0MRY4 1105 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 A0A0U1RQJ8 604 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 K7EQS6 105 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 PI15O43692 258 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 KRT1P04264 644 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 GOT1P17174 413 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 HOXC13P31276 330 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 TIE1P35590 1138 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 SLC12A1Q13621 1099 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 DMC1Q14565 340 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 E2F5Q15329 346 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 FUT11Q495W5 492 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 C2orf27AQ580R0 203 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 MBLAC2Q68D91 279 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 Q6ZS52 159 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 RFX8Q6ZV50 586 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 SETD3Q86TU7 594 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-217ENST00000569263 SYCE1Q8N0S2 351 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 ZNF513Q8N8E2 541 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-217ENST00000569263 RTL3Q8N8U3 475 aaKnown RBP13.42□□□□□ -0.26
CNOT1-217ENST00000569263 TMEM105Q8N8V8 129 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 KCTD6Q8NC69 237 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 RPLP0P6Q8NHW5 317 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 ATRIPQ8WXE1 791 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 ACDQ96AP0 544 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 CLDN23Q96B33 292 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-217ENST00000569263 IER2Q9BTL4 223 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 CALN1Q9BXU9 219 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 CHRDQ9H2X0 955 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 PCDH18Q9HCL0 1135 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 KLHL11Q9NVR0 708 aa13.42□□□□□ -0.26
CNOT1-217ENST00000569263 ELOVL2Q9NXB9 296 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms