RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 CENPIQ92674 756 aaPredicted RBP13.2□□□□□ -0.3
CDT1-203ENST00000569140 BTBD6Q96KE9 485 aa13.2□□□□□ -0.3
CDT1-203ENST00000569140 PACSIN1Q9BY11 444 aa13.2□□□□□ -0.3
CDT1-203ENST00000569140 TPSD1Q9BZJ3 242 aa13.2□□□□□ -0.3
CDT1-203ENST00000569140 GPATCH2LQ9NWQ4 482 aa13.2□□□□□ -0.3
CDT1-203ENST00000569140 ZSCAN32Q9NX65 697 aa13.2□□□□□ -0.3
CDT1-203ENST00000569140 OR12D3Q9UGF7 316 aa13.2□□□□□ -0.3
CDT1-203ENST00000569140 STARD13Q9Y3M8 1113 aa13.2□□□□□ -0.3
CDT1-203ENST00000569140 STON1Q9Y6Q2 735 aa13.2□□□□□ -0.3
CDT1-203ENST00000569140 TMEM110-MUSTN1A8MSY1 372 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 TIMM44O43615 452 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 SYNCRIPO60506 623 aaKnown RBP13.19□□□□□ -0.3
CDT1-203ENST00000569140 ADAM23O75077 832 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 CLDN11O75508 207 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 PAPSS2O95340 614 aaPredicted RBP13.19□□□□□ -0.3
CDT1-203ENST00000569140 CYP1A2P05177 515 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 OR1E1P30953 314 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 GJC1P36383 396 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 IL12RB1P42701 662 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 ST8SIA6P61647 398 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 ZNF252P-AS1Q0IIN9 211 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 ALFQ53S48 1182 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 DAB2IPQ5VWQ8 1189 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 TMEM92Q6UXU6 159 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 PRR23BQ6ZRT6 265 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 ADIPOR2Q86V24 386 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 APCDD1Q8J025 514 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 PYROXD2Q8N2H3 581 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 ZNF366Q8N895 744 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDT1-203ENST00000569140 TBC1D31Q96DN5 1066 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 FAM122AQ96E09 287 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 C1orf74Q96LT6 269 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 FAM126AQ9BYI3 521 aaPredicted RBP13.19□□□□□ -0.3
CDT1-203ENST00000569140 ZYG11BQ9C0D3 744 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 THAP10Q9P2Z0 257 aaPredicted RBP13.19□□□□□ -0.3
CDT1-203ENST00000569140 IP6K2Q9UHH9 426 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 VPS28Q9UK41 221 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 PCDHGA2Q9Y5H1 932 aa13.19□□□□□ -0.3
CDT1-203ENST00000569140 AXIN1O15169 862 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 EPHX1P07099 455 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 DLDP09622 509 aaKnown RBP13.18□□□□□ -0.3
CDT1-203ENST00000569140 HLA-EP13747 358 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 HNRNPLP14866 589 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDT1-203ENST00000569140 PRKCHP24723 683 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 MZF1P28698 734 aaPredicted RBP13.18□□□□□ -0.3
CDT1-203ENST00000569140 CTSOP43234 321 aaPredicted RBP13.18□□□□□ -0.3
CDT1-203ENST00000569140 OXCT1P55809 520 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 SRSF5Q13243 272 aaKnown RBP13.18□□□□□ -0.3
CDT1-203ENST00000569140 ASTE1Q2TB18 679 aaPredicted RBP13.18□□□□□ -0.3
CDT1-203ENST00000569140 PLEKHG6Q3KR16 790 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 C6orf118Q5T5N4 469 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 KIAA1211LQ6NV74 962 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 KIAA1324Q6UXG2 1013 aaKnown RBP13.18□□□□□ -0.3
CDT1-203ENST00000569140 CEP68Q76N32 757 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 LONP2Q86WA8 852 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 ZNF354CQ86Y25 554 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 CACUL1Q86Y37 369 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 CAMKK1Q8N5S9 505 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 FNIP1Q8TF40 1166 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 NTAN1Q96AB6 310 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 PPP1R9BQ96SB3 815 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 PHOX2BQ99453 314 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 EPAS1Q99814 870 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 MAGEB5Q9BZ81 275 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 OSBPL2Q9H1P3 480 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 DHX35Q9H5Z1 703 aaKnown RBP13.18□□□□□ -0.3
CDT1-203ENST00000569140 ZWILCHQ9H900 591 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 HCN2Q9UL51 889 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 FZD10Q9ULW2 581 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 AP4E1Q9UPM8 1137 aa13.18□□□□□ -0.3
CDT1-203ENST00000569140 FAM72CH0Y354 149 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 MYO1FO00160 1098 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 NPC1O15118 1278 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 LRIG2O94898 1065 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 IPO7O95373 1038 aaKnown RBP13.17□□□□□ -0.3
CDT1-203ENST00000569140 ASLP04424 464 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 TMEM253P0C7T8 217 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 TDGF1P13385 188 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 EPHB2P29323 1055 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 MIPP30301 263 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 CDC25BP30305 580 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 CYLC1P35663 651 aaPredicted RBP13.17□□□□□ -0.3
CDT1-203ENST00000569140 AIF1P55008 147 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 TPI1P60174 286 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 SLC12A1Q13621 1099 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 PIGHQ14442 188 aaPredicted RBP13.17□□□□□ -0.3
CDT1-203ENST00000569140 SPA17Q15506 151 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 LPAL2Q16609 132 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 SMTNL2Q2TAL5 461 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 PPP6R3Q5H9R7 873 aaPredicted RBP13.17□□□□□ -0.3
CDT1-203ENST00000569140 FAM72AQ5TYM5 149 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 RNF43Q68DV7 783 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 FAM72DQ6L9T8 149 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
CDT1-203ENST00000569140 WDR5BQ86VZ2 330 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 FAM72BQ86X60 149 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 ZNF683Q8IZ20 524 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 MDGA1Q8NFP4 955 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms