RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 E7ENQ6 273 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 TULP2O00295 520 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 MSI1O43347 362 aaKnown RBP12.93□□□□□ -0.34
SNX29-207ENST00000568949 ACSL4O60488 711 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 TRIM49P0CI25 452 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 TRIM49CP0CI26 452 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 C6P13671 934 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 SLC6A4P31645 630 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 GTF2H1P32780 548 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 ERVPABLB-1P60509 514 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 KMT5BQ4FZB7 885 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 FAM133BQ5BKY9 247 aaKnown RBP12.93□□□□□ -0.34
SNX29-207ENST00000568949 PRPF39Q86UA1 669 aaKnown RBP12.93□□□□□ -0.34
SNX29-207ENST00000568949 HJURPQ8NCD3 748 aaPredicted RBP12.93□□□□□ -0.34
SNX29-207ENST00000568949 KCTD13Q8WZ19 329 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 FAM129BQ96TA1 746 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 DDX50Q9BQ39 737 aaKnown RBP12.93□□□□□ -0.34
SNX29-207ENST00000568949 KDM4CQ9H3R0 1056 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 TMEM8AQ9HCN3 771 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 CNGB3Q9NQW8 809 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 FAM13BQ9NYF5 915 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 STIM2Q9P246 746 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 ERVW-1Q9UQF0 538 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 DMTF1Q9Y222 760 aa12.93□□□□□ -0.34
SNX29-207ENST00000568949 TBC1D3DA0A087WVF3 549 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TBC1D3IA0A087WXS9 549 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TBC1D3EA0A087X179 549 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TBC1D3KA0A087X1G2 549 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TYW5A2RUC4 315 aaKnown RBP12.92□□□□□ -0.34
SNX29-207ENST00000568949 TBC1D3FA6NER0 549 aaPredicted RBP12.92□□□□□ -0.34
SNX29-207ENST00000568949 TTC34A8MYJ7 566 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TBC1D3LB9A6J9 549 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TRIM38O00635 465 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 SIGLEC6O43699 453 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TBC1D3HP0C7X1 549 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 KRT13P13646 458 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 PSMD8P48556 350 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 MCCD1P59942 119 aaPredicted RBP12.92□□□□□ -0.34
SNX29-207ENST00000568949 PPP2CBP62714 309 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 PPP2CAP67775 309 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 KCNC4Q03721 635 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 ADIGQ0VDE8 80 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 BST2Q10589 180 aaKnown RBP12.92□□□□□ -0.34
SNX29-207ENST00000568949 NFIL3Q16649 462 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 GOLGA7BQ2TAP0 167 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 ARHGAP40Q5TG30 622 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 CDCP2Q5VXM1 449 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 KRT39Q6A163 491 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TBC1D3GQ6DHY5 549 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TBC1D3CQ6IPX1 549 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 CCDC117Q8IWD4 279 aaPredicted RBP12.92□□□□□ -0.34
SNX29-207ENST00000568949 CEP57L1Q8IYX8 460 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TBC1D3Q8IZP1 549 aaPredicted RBP12.92□□□□□ -0.34
SNX29-207ENST00000568949 SIX6OS1Q8N1H7 587 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 FAM181AQ8N9Y4 354 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TTC9Q92623 222 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TATDN2Q93075 761 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 FAM131CQ96AQ9 280 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 NAF1Q96HR8 494 aaKnown RBP12.92□□□□□ -0.34
SNX29-207ENST00000568949 INTS4Q96HW7 963 aaKnown RBP12.92□□□□□ -0.34
SNX29-207ENST00000568949 DPH1Q9BZG8 443 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 SEMA4CQ9C0C4 833 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 CPNE5Q9HCH3 593 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 ARHGAP20Q9P2F6 1191 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 NYNRINQ9P2P1 1898 aaKnown RBP12.92□□□□□ -0.34
SNX29-207ENST00000568949 HESX1Q9UBX0 185 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 TSPAN16Q9UKR8 245 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 PCDHB1Q9Y5F3 818 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 DOCK9Q9BZ29 2069 aa12.92□□□□□ -0.34
SNX29-207ENST00000568949 ARHGAP6O43182 974 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 SLC7A4O43246 635 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 MOCS3O95396 460 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 MPOP05164 745 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 NR2F2P24468 414 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 MZF1P28698 734 aaPredicted RBP12.91□□□□□ -0.34
SNX29-207ENST00000568949 DRD3P35462 400 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 LSSP48449 732 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 DAOAP59103 153 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 DAB2P98082 770 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 ECT2LQ008S8 904 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 VAC14Q08AM6 782 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 CDH18Q13634 790 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 ELAVL3Q14576 367 aaKnown RBP12.91□□□□□ -0.34
SNX29-207ENST00000568949 HS1BP3Q53T59 392 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 PITRM1Q5JRX3 1037 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 NADSYN1Q6IA69 706 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 FAM186BQ8IYM0 893 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 GRAMD1CQ8IYS0 662 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 STK40Q8N2I9 435 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 SLC25A45Q8N413 288 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 OR4C6Q8NH72 309 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 KCNE4Q8WWG9 221 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 IRGQQ8WZA9 623 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 SEMA4DQ92854 862 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 PTPRN2Q92932 1015 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 PRICKLE1Q96MT3 831 aaPredicted RBP12.91□□□□□ -0.34
SNX29-207ENST00000568949 DEPDC7Q96QD5 511 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 MMRN2Q9H8L6 949 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 POLR1BQ9H9Y6 1135 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 CYTH4Q9UIA0 394 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms