RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 HCAR3P49019 387 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 ARSEP51690 589 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 CDH6P55285 790 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 MESP2Q0VG99 397 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 PDK2Q15119 407 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 FSCBQ5H9T9 825 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 FSTL4Q6MZW2 842 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 NUDT18Q6ZVK8 323 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 TFAP2DQ7Z6R9 452 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 NT5DC3Q86UY8 548 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 NLRP14Q86W24 1093 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 MAP7D3Q8IWC1 876 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.23■□□□□ 0.35
COMMD4-224ENST00000568877 TERB1Q8NA31 727 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 LMLNQ96KR4 655 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 NELL2Q99435 816 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 MFSD1Q9H3U5 465 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 EPHX3Q9H6B9 360 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 CATSPERBQ9H7T0 1116 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 LTB4R2Q9NPC1 389 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 ABCB8Q9NUT2 735 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 KLHL11Q9NVR0 708 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 TRMT1Q9NXH9 659 aaKnown RBP17.23■□□□□ 0.35
COMMD4-224ENST00000568877 DDX56Q9NY93 547 aaKnown RBP17.23■□□□□ 0.35
COMMD4-224ENST00000568877 KIAA1522Q9P206 1035 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-224ENST00000568877 ZNF212Q9UDV6 495 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 AMFRQ9UKV5 643 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 NDRG2Q9UN36 371 aaKnown RBP17.23■□□□□ 0.35
COMMD4-224ENST00000568877 TBC1D30Q9Y2I9 924 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 MUC3AQ02505 3323 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 TBC1D3BA6NDS4 549 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 WASH4PA8MWX3 477 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 FGF10O15520 208 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-224ENST00000568877 DAPK3O43293 454 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 CD48P09326 243 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
COMMD4-224ENST00000568877 OR1E1P30953 314 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 CD70P32970 193 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 OXCT1P55809 520 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 LMAN2Q12907 356 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 UBXN2BQ14CS0 331 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 GEN1Q17RS7 908 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 CXorf57Q6NSI4 855 aaKnown RBP17.22■□□□□ 0.35
COMMD4-224ENST00000568877 RFX8Q6ZV50 586 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 PEX26Q7Z412 305 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 KIAA0907Q7Z7F0 614 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-224ENST00000568877 SETD3Q86TU7 594 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-224ENST00000568877 ZNF687Q8N1G0 1237 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 RAPGEF5Q92565 580 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 TSC1Q92574 1164 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 CSPG4P5Q96PW8 444 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 FOXQ1Q9C009 403 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 TMEM248Q9NWD8 314 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 RCOR3Q9P2K3 495 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-224ENST00000568877 GGA2Q9UJY4 613 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.22■□□□□ 0.35
COMMD4-224ENST00000568877 MTF2Q9Y483 593 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-224ENST00000568877 TRIOO75962 3097 aa17.22■□□□□ 0.35
COMMD4-224ENST00000568877 MYOFQ9NZM1 2061 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 CCDC66A2RUB6 948 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 FAM170BA6NMN3 283 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 FTCDO95954 541 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 PDGFBP01127 241 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-224ENST00000568877 EGFP01133 1207 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 PABPC1P11940 636 aaKnown RBP17.21■□□□□ 0.35
COMMD4-224ENST00000568877 KDELR1P24390 212 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 IL4RP24394 825 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 CTNNA2P26232 953 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 CTNNA1P35221 906 aaKnown RBP17.21■□□□□ 0.35
COMMD4-224ENST00000568877 TNFRSF4P43489 277 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 MAPKAPK2P49137 400 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 SLC12A1Q13621 1099 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 CCINQ13939 588 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 DPYSQ14117 519 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 DPYSL3Q14195 570 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 ODF2Q5BJF6 829 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 C6orf118Q5T5N4 469 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 ANKS1BQ7Z6G8 1248 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 SFTPA1Q8IWL2 248 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 AHI1Q8N157 1196 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 RTL3Q8N8U3 475 aaKnown RBP17.21■□□□□ 0.35
COMMD4-224ENST00000568877 FLCNQ8NFG4 579 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 WFIKKN2Q8TEU8 576 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 KRT35Q92764 455 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 EZH1Q92800 747 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-224ENST00000568877 ALS2CR12Q96Q35 445 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 CALN1Q9BXU9 219 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 OSBPL6Q9BZF3 934 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 DONSONQ9NYP3 566 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 DNAI1Q9UI46 699 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 PCDHA3Q9Y5H8 950 aa17.21■□□□□ 0.35
COMMD4-224ENST00000568877 LRRD1A4D1F6 860 aa17.2■□□□□ 0.34
COMMD4-224ENST00000568877 PRRT4C9JH25 899 aa17.2■□□□□ 0.34
COMMD4-224ENST00000568877 K7EQS6 105 aa17.2■□□□□ 0.34
COMMD4-224ENST00000568877 KRT1P04264 644 aa17.2■□□□□ 0.34
COMMD4-224ENST00000568877 RHOCP08134 193 aa17.2■□□□□ 0.34
COMMD4-224ENST00000568877 CHRNB1P11230 501 aa17.2■□□□□ 0.34
COMMD4-224ENST00000568877 ERCC2P18074 760 aa17.2■□□□□ 0.34
COMMD4-224ENST00000568877 CSKP41240 450 aa17.2■□□□□ 0.34
COMMD4-224ENST00000568877 MARCKSL1P49006 195 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms