RNA–Protein interactions for RNA: ENST00000568562.1

ATP6V0C-204, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

TSL 3 BASIC

Gene ATP6V0C, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-204ENST00000568562 PPP2CBP62714 309 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 PPP2CAP67775 309 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 LRMPQ12912 555 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 EDRF1Q3B7T1 1238 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 PKDCCQ504Y2 493 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 FSCBQ5H9T9 825 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 PITRM1Q5JRX3 1037 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 CFAP52Q8N1V2 620 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 SCML4Q8N228 414 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 OR14C36Q8NHC7 312 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 TSC1Q92574 1164 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 IRX2Q9BZI1 471 aaPredicted RBP19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 NUCKS1Q9H1E3 243 aaKnown RBP19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 CEP83Q9Y592 693 aa19.3■□□□□ 0.68
ATP6V0C-204ENST00000568562 EDDM13A0A1B0GTR0 161 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 CETN3O15182 167 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 LTFP02788 710 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 HSP90AA1P07900 732 aaKnown RBP19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 NUMBP49757 651 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 YWHAEP62258 255 aaKnown RBP19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 RTP5Q14D33 572 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 PMF1Q6P1K2 205 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 SND1Q7KZF4 910 aaKnown RBP eCLIP19.29■□□□□ 0.684e-17■■■□□ 17.4
ATP6V0C-204ENST00000568562 CCDC117Q8IWD4 279 aaPredicted RBP19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 STK40Q8N2I9 435 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 UBR7Q8N806 425 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 BAP1Q92560 729 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 FCRL2Q96LA5 508 aaPredicted RBP19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 FAM129BQ96TA1 746 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 NRSN2Q9GZP1 204 aa19.29■□□□□ 0.68
ATP6V0C-204ENST00000568562 ITIH6Q6UXX5 1313 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 TARSL2A2RTX5 802 aaKnown RBP19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 C10orf142B7Z368 130 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 M0QYV0 167 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 TK2O00142 265 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 TLR4O00206 839 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 MOCS2O96007 188 aaPredicted RBP19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 CENPBP07199 599 aaPredicted RBP19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 SRPRAP08240 638 aaKnown RBP19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 ARID5BQ14865 1188 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 SLC45A4Q5BKX6 768 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 MS4A13Q5J8X5 152 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 KDM1BQ8NB78 822 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 SNIP1Q8TAD8 396 aaKnown RBP19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 IRGQQ8WZA9 623 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 TFAP2BQ92481 460 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 AZIN2Q96A70 460 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 RPL10LQ96L21 214 aaKnown RBP19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 DDX50Q9BQ39 737 aaKnown RBP19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 SLCO3A1Q9UIG8 710 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 COQ4Q9Y3A0 265 aa19.28■□□□□ 0.68
ATP6V0C-204ENST00000568562 BRINP1O60477 761 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 LUC7L3O95232 432 aaKnown RBP19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 MOCS3O95396 460 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 ADH1BP00325 375 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 IL1BP01584 269 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 GOT1P17174 413 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 C5AR1P21730 350 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 MZF1P28698 734 aaPredicted RBP19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 STK19P49842 368 aaPredicted RBP19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 DCAF6Q58WW2 860 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 SFMBT2Q5VUG0 894 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 RNF219Q5W0B1 726 aaPredicted RBP19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 TMEM270Q6UE05 265 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 LCLAT1Q6UWP7 414 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 SPATS2Q86XZ4 545 aaKnown RBP19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 APCDD1Q8J025 514 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 OXR1Q8N573 874 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 DQX1Q8TE96 717 aaKnown RBP19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 SLC35F5Q8WV83 523 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 SPATA32Q96LK8 384 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 MIS12Q9H081 205 aa19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 HELZ2Q9BYK8 2649 aaKnown RBP19.27■□□□□ 0.68
ATP6V0C-204ENST00000568562 TBC1D3DA0A087WVF3 549 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 TBC1D3IA0A087WXS9 549 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 TBC1D3EA0A087X179 549 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 TBC1D3KA0A087X1G2 549 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 TBC1D3FA6NER0 549 aaPredicted RBP19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 TBC1D3LB9A6J9 549 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 SDC3O75056 442 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 CALCAP01258 141 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 TBC1D3HP0C7X1 549 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 CKMT2P17540 419 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 BRD2P25440 801 aaKnown RBP19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 RXRGP48443 463 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 METAP1P53582 386 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 ECT2LQ008S8 904 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 CCDC173Q0VFZ6 552 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 TBC1D3GQ6DHY5 549 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 TBC1D3CQ6IPX1 549 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 NAPEPLDQ6IQ20 393 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 KRBA2Q6ZNG9 492 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 KANSL1Q7Z3B3 1105 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 HSCBQ8IWL3 235 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 TBC1D3Q8IZP1 549 aaPredicted RBP19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 PTPRN2Q92932 1015 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 SNX21Q969T3 373 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 SERPINB11Q96P15 392 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 ZSWIM1Q9BR11 485 aa19.26■□□□□ 0.67
ATP6V0C-204ENST00000568562 XPO7Q9UIA9 1087 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms