RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 PITX1P78337 314 aaPredicted RBP13.87□□□□□ -0.19
CLK3-218ENST00000566926 TUBB2AQ13885 445 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 STARD3Q14849 445 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 SLC25A52Q3SY17 297 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 RABGAP1LQ5R372 815 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 TTC39BQ5VTQ0 682 aaPredicted RBP13.87□□□□□ -0.19
CLK3-218ENST00000566926 RNF43Q68DV7 783 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 NADSYN1Q6IA69 706 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 MFN1Q8IWA4 741 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 PGBD3Q8N328 593 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLK3-218ENST00000566926 FIBINQ8TAL6 211 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 PGAP3Q96FM1 320 aaPredicted RBP13.87□□□□□ -0.19
CLK3-218ENST00000566926 LOXL4Q96JB6 756 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 NPY6RQ99463 290 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 TUBB2BQ9BVA1 445 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 CIPCQ9C0C6 399 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 WDCPQ9H6R7 721 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 MRPL47Q9HD33 250 aaKnown RBP13.87□□□□□ -0.19
CLK3-218ENST00000566926 STIM2Q9P246 746 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 THAP10Q9P2Z0 257 aaPredicted RBP13.87□□□□□ -0.19
CLK3-218ENST00000566926 GGA2Q9UJY4 613 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 CLEC4EQ9ULY5 219 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 PLA2G4CQ9UP65 541 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 SCINQ9Y6U3 715 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 GVINP1Q7Z2Y8 2422 aa13.87□□□□□ -0.19
CLK3-218ENST00000566926 USP34Q70CQ2 3546 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 GPR179Q6PRD1 2367 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 TCRBV21S2A2A0A5A6 115 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 MACROD2A1Z1Q3 448 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 CTAGE9A4FU28 777 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 ANTXRLA6NF34 631 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 TMCO5BA8MYB1 307 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 H0Y626 953 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 GOLGA8SH3BPF8 625 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 LRP3O75074 770 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 RHOBTB1O94844 696 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 MOCS3O95396 460 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 CYP1A2P05177 515 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 RETP07949 1114 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 PABPC1P11940 636 aaKnown RBP13.86□□□□□ -0.19
CLK3-218ENST00000566926 HLA-FP30511 346 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 CASQ1P31415 396 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 PI4KAP42356 2102 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 WASP42768 502 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 NAP1L1P55209 391 aaKnown RBP13.86□□□□□ -0.19
CLK3-218ENST00000566926 OXCT1P55809 520 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 DEUP1Q05D60 604 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 SRSF5Q13243 272 aaKnown RBP13.86□□□□□ -0.19
CLK3-218ENST00000566926 CDH18Q13634 790 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 ELF2Q15723 593 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 ZNF569Q5MCW4 686 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 RAP1GAP2Q684P5 730 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 MMS22LQ6ZRQ5 1243 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 CHST9Q7L1S5 443 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 MON1BQ7L1V2 547 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 KIAA0907Q7Z7F0 614 aaPredicted RBP13.86□□□□□ -0.19
CLK3-218ENST00000566926 MCOLN2Q8IZK6 566 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 LGI2Q8N0V4 545 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 CARNMT1Q8N4J0 409 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 MDGA1Q8NFP4 955 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 NT5C3BQ969T7 300 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 P2RY11Q96G91 374 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 ZC3H10Q96K80 434 aaKnown RBP13.86□□□□□ -0.19
CLK3-218ENST00000566926 SPACA7Q96KW9 195 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 PACSIN1Q9BY11 444 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 ZDHHC4Q9NPG8 344 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 RRAGDQ9NQL2 400 aaPredicted RBP13.86□□□□□ -0.19
CLK3-218ENST00000566926 ABCB8Q9NUT2 735 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 ADAM22Q9P0K1 906 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 KIAA1522Q9P206 1035 aaPredicted RBP13.86□□□□□ -0.19
CLK3-218ENST00000566926 HCN2Q9UL51 889 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 JRKLQ9Y4A0 524 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 STON1Q9Y6Q2 735 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 GON4LQ3T8J9 2241 aa13.86□□□□□ -0.19
CLK3-218ENST00000566926 SYNCRIPO60506 623 aaKnown RBP13.85□□□□□ -0.19
CLK3-218ENST00000566926 LUC7L3O95232 432 aaKnown RBP13.85□□□□□ -0.19
CLK3-218ENST00000566926 POLR2EP19388 210 aaKnown RBP13.85□□□□□ -0.19
CLK3-218ENST00000566926 HOXC13P31276 330 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 NOP2P46087 812 aaKnown RBP13.85□□□□□ -0.19
CLK3-218ENST00000566926 CXCR3P49682 368 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 SGSHP51688 502 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 GSCP56915 257 aaPredicted RBP13.85□□□□□ -0.19
CLK3-218ENST00000566926 RPS24P62847 133 aaKnown RBP13.85□□□□□ -0.19
CLK3-218ENST00000566926 SLC12A1Q13621 1099 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 ENPP2Q13822 863 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 ZNF234Q14588 700 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 SYT10Q6XYQ8 523 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 HMGB4Q8WW32 186 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 ZNF653Q96CK0 615 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 PRICKLE1Q96MT3 831 aaPredicted RBP13.85□□□□□ -0.19
CLK3-218ENST00000566926 ACOX2Q99424 681 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 NAPGQ99747 312 aaPredicted RBP13.85□□□□□ -0.19
CLK3-218ENST00000566926 C11orf70Q9BRQ4 267 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 TPSD1Q9BZJ3 242 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 THAP2Q9H0W7 228 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 PARVAQ9NVD7 372 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 CACNA2D2Q9NY47 1150 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 TAS2R14Q9NYV8 317 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 DNAI1Q9UI46 699 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms