RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 BVESQ8NE79 360 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 ERMNQ8TAM6 284 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 METTL6Q8TCB7 284 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 CALML6Q8TD86 181 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 GANCQ8TET4 914 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 SELENOMQ8WWX9 145 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 AUTS2Q8WXX7 1259 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 KLHL6Q8WZ60 621 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 RGMAQ96B86 450 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 EAF2Q96CJ1 260 aaPredicted RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 OPTNQ96CV9 577 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PANX2Q96RD6 677 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 EDEM2Q9BV94 578 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 GON7Q9BXV9 100 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TRIM2Q9C040 744 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 NDUFA13Q9P0J0 144 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 AMACRQ9UHK6 382 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 MBD1Q9UIS9 605 aaPredicted RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 PCDHA1Q9Y5I3 950 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 SPACA6W5XKT8 324 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 NUP98P52948 1817 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 POLR2AP24928 1970 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 RNF123Q5XPI4 1314 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 NPC1L1Q9UHC9 1359 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 MANSC4A6NHS7 340 aaPredicted RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 CHURC1-FNTBB4DL54 471 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TGFBR3LH3BV60 316 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 J3QL48 77 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PLK4O00444 970 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 CTDSP2O14595 271 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 ZNF862O60290 1169 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 CIDEAO60543 219 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 KCNJ13O60928 360 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 RNGTTO60942 597 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 DAB1O75553 588 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 SLC22A3O75751 556 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PDE8BO95263 885 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TUBB4AP04350 444 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 CKMP06732 381 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 FHP07954 510 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TMEM253P0C7T8 217 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 UBL4AP11441 157 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 MYF5P13349 255 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 NME1P15531 152 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 RHOQP17081 205 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 CCNA2P20248 432 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 SP100P23497 879 aaPredicted RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 AOAHP28039 575 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 HOXC9P31274 260 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 BMI1P35226 326 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 HAAOP46952 286 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 BCAP31P51572 246 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 EPHB3P54753 998 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 IRF9Q00978 393 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 RPL6Q02878 288 aaKnown RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 GPS1Q13098 491 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 ITGA7Q13683 1181 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TMEM132BQ14DG7 1078 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PCGF3Q3KNV8 242 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TMEM177Q53S58 311 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 MPP7Q5T2T1 576 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TBC1D9BQ66K14 1250 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TMEM270Q6UE05 265 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 LRIG3Q6UXM1 1119 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 ZNF852Q6ZMS4 543 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 FAM83HQ6ZRV2 1179 aaPredicted RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 PTCHD4Q6ZW05 846 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 ST13P4Q8IZP2 240 aaPredicted RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 CCNYQ8ND76 341 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 GLIS3Q8NEA6 775 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PSMA8Q8TAA3 256 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 KTI12Q96EK9 354 aaPredicted RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 TRAPPC9Q96Q05 1148 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PSKH2Q96QS6 385 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TUBGCP5Q96RT8 1024 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 CITED1Q99966 193 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TMEM117Q9H0C3 514 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 NRIP3Q9NQ35 241 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 SOHLH2Q9NX45 425 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 KCND3Q9UK17 655 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TLK1Q9UKI8 766 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 CAPN11Q9UMQ6 739 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 ERVK-19Q9WJR5 959 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 ASB3Q9Y575 518 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 PCDHA3Q9Y5H8 950 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 TACC3Q9Y6A5 838 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 COMMD3-BMI1R4GMX3 469 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 LOC100506127A0A0U1RQW1 187 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 LRRN2O75325 713 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 GAS8O95995 478 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 EGFRP00533 1210 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 IL1AP01583 271 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 GLAP06280 429 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 ABCB1P08183 1280 aaPredicted RBP3.17□□□□□ -1.9
CHD9-216ENST00000565803 HNRNPLP14866 589 aaKnown RBP eCLIP3.17□□□□□ -1.9
CHD9-216ENST00000565803 RFC4P35249 363 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 RANBP1P43487 201 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 GPR3P46089 330 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 LIG4P49917 911 aa3.17□□□□□ -1.9
CHD9-216ENST00000565803 CCT4P50991 539 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms