RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 OXCT1P55809 520 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 SFSWAPQ12872 951 aaKnown RBP20.52■□□□□ 0.88
CLN6-206ENST00000565471 FOXC1Q12948 553 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 RAPGEF1Q13905 1077 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 DRAP1Q14919 205 aaPredicted RBP20.52■□□□□ 0.88
CLN6-206ENST00000565471 ST3GAL2Q16842 350 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 C9orf64Q5T6V5 341 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 IL27RAQ6UWB1 636 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 CCAR2Q8N163 923 aaKnown RBP20.52■□□□□ 0.88
CLN6-206ENST00000565471 TMEM35BQ8NCS4 154 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 RNF34Q969K3 372 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 PABPC3Q9H361 631 aaKnown RBP20.52■□□□□ 0.88
CLN6-206ENST00000565471 OSGEPQ9NPF4 335 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 SAMSN1Q9NSI8 373 aaKnown RBP20.52■□□□□ 0.88
CLN6-206ENST00000565471 RRN3Q9NYV6 651 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 NCKAP1Q9Y2A7 1128 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 FHOD1Q9Y613 1164 aa20.52■□□□□ 0.88
CLN6-206ENST00000565471 SYNJ2BP-COX16A0A087WUM0 186 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 EDDM13A0A1B0GTR0 161 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 CYP11B1P15538 503 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 SCNN1AP37088 669 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 ANP32AP39687 249 aaKnown RBP20.51■□□□□ 0.87
CLN6-206ENST00000565471 MATKP42679 507 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 CTSOP43234 321 aaPredicted RBP20.51■□□□□ 0.87
CLN6-206ENST00000565471 PLK1P53350 603 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 SULT2A1Q06520 285 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 TCP11X2Q5H9J9 407 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 RNF219Q5W0B1 726 aaPredicted RBP20.51■□□□□ 0.87
CLN6-206ENST00000565471 FBXL22Q6P050 247 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 DHX40Q8IX18 779 aaKnown RBP20.51■□□□□ 0.87
CLN6-206ENST00000565471 APCDD1Q8J025 514 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 SNX19Q92543 992 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 NAA15Q9BXJ9 866 aaKnown RBP20.51■□□□□ 0.87
CLN6-206ENST00000565471 PLCB1Q9NQ66 1216 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 LMBRD1Q9NUN5 540 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 COX16Q9P0S2 106 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 NUMA1Q14980 2115 aa20.51■□□□□ 0.87
CLN6-206ENST00000565471 TTC34A8MYJ7 566 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 M0QYT0 321 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 PES1O00541 588 aaKnown RBP20.5■□□□□ 0.87
CLN6-206ENST00000565471 ZNF883P0CG24 379 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 UCHL3P15374 230 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 GABRB2P47870 512 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 AFF3P51826 1226 aaKnown RBP20.5■□□□□ 0.87
CLN6-206ENST00000565471 SIM1P81133 766 aaPredicted RBP20.5■□□□□ 0.87
CLN6-206ENST00000565471 NME3Q13232 169 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 AUHQ13825 339 aaKnown RBP20.5■□□□□ 0.87
CLN6-206ENST00000565471 CXorf57Q6NSI4 855 aaKnown RBP20.5■□□□□ 0.87
CLN6-206ENST00000565471 ENOX1Q8TC92 643 aaKnown RBP20.5■□□□□ 0.87
CLN6-206ENST00000565471 BIRC7Q96CA5 298 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 RPRD1AQ96P16 312 aaPredicted RBP20.5■□□□□ 0.87
CLN6-206ENST00000565471 PPP1R9BQ96SB3 815 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 NPY6RQ99463 290 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 PDCL3Q9H2J4 239 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 TMEM51Q9NW97 253 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 SLCO3A1Q9UIG8 710 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 STAP1Q9ULZ2 295 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 EPG5Q9HCE0 2579 aa20.5■□□□□ 0.87
CLN6-206ENST00000565471 SPAARA0A1B0GVQ0 90 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 CER1O95813 267 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 PDGFRAP16234 1089 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 NNMTP40261 264 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 VASPP50552 380 aaPredicted RBP20.49■□□□□ 0.87
CLN6-206ENST00000565471 BNC1Q01954 994 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 CST6Q15828 149 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 C5orf22Q49AR2 442 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 OTUD1Q5VV17 481 aaPredicted RBP20.49■□□□□ 0.87
CLN6-206ENST00000565471 CIR1Q86X95 450 aaPredicted RBP20.49■□□□□ 0.87
CLN6-206ENST00000565471 IGSF8Q969P0 613 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 NT5C3BQ969T7 300 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 STK33Q9BYT3 514 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 FBXL12Q9NXK8 326 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.49■□□□□ 0.87
CLN6-206ENST00000565471 FZD4Q9ULV1 537 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 HS3ST4Q9Y661 456 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 CHD8Q9HCK8 2581 aa20.49■□□□□ 0.87
CLN6-206ENST00000565471 NYNRINQ9P2P1 1898 aaKnown RBP20.49■□□□□ 0.87
CLN6-206ENST00000565471 MAP1BP46821 2468 aaKnown RBP20.48■□□□□ 0.87
CLN6-206ENST00000565471 PAGE1O75459 146 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 LSM8O95777 96 aaKnown RBP20.48■□□□□ 0.87
CLN6-206ENST00000565471 CD27P26842 260 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 MZF1P28698 734 aaPredicted RBP20.48■□□□□ 0.87
CLN6-206ENST00000565471 GRIA4P48058 902 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 CXCR3P49682 368 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 CENPCQ03188 943 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 TEAD4Q15561 434 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 BRMS1LQ5PSV4 323 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 MMAAQ8IVH4 418 aaKnown RBP20.48■□□□□ 0.87
CLN6-206ENST00000565471 GANCQ8TET4 914 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 PTPRN2Q92932 1015 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 C18orf8Q96DM3 657 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 PGAP3Q96FM1 320 aaPredicted RBP20.48■□□□□ 0.87
CLN6-206ENST00000565471 RPL10LQ96L21 214 aaKnown RBP20.48■□□□□ 0.87
CLN6-206ENST00000565471 GAREM1Q9H706 876 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 PIGVQ9NUD9 493 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 ARHGEF38Q9NXL2 777 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 ADAMTS1Q9UHI8 967 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 VANGL2Q9ULK5 521 aa20.48■□□□□ 0.87
CLN6-206ENST00000565471 CACNA1BQ00975 2339 aa20.47■□□□□ 0.87
CLN6-206ENST00000565471 A0A1B0GVT2 93 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms