RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 SALL4Q9UJQ4 1053 aa26.76■■□□□ 1.87
NME3-208ENST00000565379 TMEM110-MUSTN1A8MSY1 372 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 HRO43593 1189 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 BUB1O43683 1085 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 PAPSS2O95340 614 aaPredicted RBP26.75■■□□□ 1.87
NME3-208ENST00000565379 ADH5P11766 374 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 SDHBP21912 280 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 HTR7P34969 479 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 SSR1P43307 286 aaKnown RBP26.75■■□□□ 1.87
NME3-208ENST00000565379 MESP2Q0VG99 397 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 RSPO4Q2I0M5 234 aaPredicted RBP26.75■■□□□ 1.87
NME3-208ENST00000565379 C5orf22Q49AR2 442 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 LRRC38Q5VT99 294 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 POLNQ7Z5Q5 900 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 DAAM2Q86T65 1068 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 TMEM25Q86YD3 366 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 SFTPA1Q8IWL2 248 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 SIK2Q9H0K1 926 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 OR12D3Q9UGF7 316 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 ALG6Q9Y672 507 aa26.75■■□□□ 1.87
NME3-208ENST00000565379 GOLGA6L7A0A1B0GV03 622 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 MACROD2A1Z1Q3 448 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 I6L893 689 aaPredicted RBP26.74■■□□□ 1.87
NME3-208ENST00000565379 PENKP01210 267 aaPredicted RBP26.74■■□□□ 1.87
NME3-208ENST00000565379 SLC6A4P31645 630 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 L1CAMP32004 1257 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 OPRD1P41143 372 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 SLC25A11Q02978 314 aaKnown RBP26.74■■□□□ 1.87
NME3-208ENST00000565379 ANO4Q32M45 955 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 PREPLQ4J6C6 727 aaPredicted RBP26.74■■□□□ 1.87
NME3-208ENST00000565379 TPGS1Q6ZTW0 290 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 LGI2Q8N0V4 545 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 SYNPOQ8N3V7 929 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 KIAA1524Q8TCG1 905 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 DDI1Q8WTU0 396 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 CD101Q93033 1021 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 XPO6Q96QU8 1125 aaKnown RBP26.74■■□□□ 1.87
NME3-208ENST00000565379 BBS2Q9BXC9 721 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 PPARGC1AQ9UBK2 798 aaKnown RBP26.74■■□□□ 1.87
NME3-208ENST00000565379 AP4E1Q9UPM8 1137 aa26.74■■□□□ 1.87
NME3-208ENST00000565379 MED19A0JLT2 244 aaPredicted RBP26.73■■□□□ 1.87
NME3-208ENST00000565379 SPOPO43791 374 aa26.73■■□□□ 1.87
NME3-208ENST00000565379 COMTP21964 271 aa26.73■■□□□ 1.87
NME3-208ENST00000565379 EIF2DP41214 584 aaKnown RBP26.73■■□□□ 1.87
NME3-208ENST00000565379 FBXL22Q6P050 247 aa26.73■■□□□ 1.87
NME3-208ENST00000565379 PEBP4Q96S96 227 aa26.73■■□□□ 1.87
NME3-208ENST00000565379 EPAS1Q99814 870 aa26.73■■□□□ 1.87
NME3-208ENST00000565379 SNRNP25Q9BV90 132 aaKnown RBP26.73■■□□□ 1.87
NME3-208ENST00000565379 SLC2A11Q9BYW1 496 aa26.73■■□□□ 1.87
NME3-208ENST00000565379 GUCA1BQ9UMX6 200 aa26.73■■□□□ 1.87
NME3-208ENST00000565379 IGLV3-10A0A075B6K4 115 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 GOLGA6L9A6NEM1 432 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.72■■□□□ 1.87
NME3-208ENST00000565379 HS1BP3Q53T59 392 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 FYB2Q5VWT5 728 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 RFWD3Q6PCD5 774 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 PRR23BQ6ZRT6 265 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 CYP4V2Q6ZWL3 525 aaPredicted RBP26.72■■□□□ 1.87
NME3-208ENST00000565379 C12orf40Q86WS4 652 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 CCDC117Q8IWD4 279 aaPredicted RBP26.72■■□□□ 1.87
NME3-208ENST00000565379 RHOT1Q8IXI2 618 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 RPRD1AQ96P16 312 aaPredicted RBP26.72■■□□□ 1.87
NME3-208ENST00000565379 LZTFL1Q9NQ48 299 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 TRIM10Q9UDY6 481 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 KIAA1549LQ6ZVL6 1849 aa26.72■■□□□ 1.87
NME3-208ENST00000565379 DRGXA6NNA5 263 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 E9PAM4 449 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 NEDD8-MDP1E9PL57 170 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 CACNG3O60359 315 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 TYRP14679 529 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 DRD1P21728 446 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 IL1R2P27930 398 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 SLC6A11P48066 632 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 DPYSL2Q16555 572 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 RNF43Q68DV7 783 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 ZNF683Q8IZ20 524 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 LRRC57Q8N9N7 239 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 RPLP0P6Q8NHW5 317 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 ALS2CR12Q96Q35 445 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 ZWILCHQ9H900 591 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 PARD6AQ9NPB6 346 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 TMPRSS4Q9NRS4 437 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 DONSONQ9NYP3 566 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 VANGL2Q9ULK5 521 aa26.71■■□□□ 1.87
NME3-208ENST00000565379 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.71■■□□□ 1.87
NME3-208ENST00000565379 A0A0U1RQJ8 604 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 PRR5-ARHGAP8B1AHC4 643 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 PSTPIP1O43586 416 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 TSPAN3O60637 253 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 TBL1XO60907 577 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 MOCS3O95396 460 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 RARAP10276 462 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 ARHGAP8P85298 464 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 MANEALQ5VSG8 457 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 DAB2IPQ5VWQ8 1189 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 CHST9Q7L1S5 443 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 LONP2Q86WA8 852 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 MAP7D3Q8IWC1 876 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 TBC1D31Q96DN5 1066 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 PRICKLE1Q96MT3 831 aaPredicted RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms