RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 SHCBP1LQ9BZQ2 653 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CDH19Q9H159 772 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 EBF3Q9H4W6 596 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 CYP4F11Q9HBI6 524 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 IL1RAPL1Q9NZN1 696 aa7.44□□□□□ -1.22
SMG1-210ENST00000565224 E2F8A0AVK6 867 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 TMEM114B3SHH9 223 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 ADCY6O43306 1168 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 ZNF189O75820 626 aaPredicted RBP7.43□□□□□ -1.22
SMG1-210ENST00000565224 HSPA4LO95757 839 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 GNL1P36915 607 aaPredicted RBP7.43□□□□□ -1.22
SMG1-210ENST00000565224 IREB2P48200 963 aaKnown RBP7.43□□□□□ -1.22
SMG1-210ENST00000565224 LIMK2P53671 638 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 TBL3Q12788 808 aaKnown RBP7.43□□□□□ -1.22
SMG1-210ENST00000565224 FRG1Q14331 258 aaKnown RBP7.43□□□□□ -1.22
SMG1-210ENST00000565224 GRIK4Q16099 956 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 GLRA4Q5JXX5 417 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 FBXO47Q5MNV8 452 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 OTUD1Q5VV17 481 aaPredicted RBP7.43□□□□□ -1.22
SMG1-210ENST00000565224 SLC27A1Q6PCB7 646 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 EPGNQ6UW88 154 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 RNF111Q6ZNA4 994 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 FRMD7Q6ZUT3 714 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 ERO1BQ86YB8 467 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 ARHGAP18Q8N392 663 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 PHTF2Q8N3S3 785 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 FBXW8Q8N3Y1 598 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMG1-210ENST00000565224 OR52K1Q8NGK4 314 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 SREK1Q8WXA9 508 aaKnown RBP7.43□□□□□ -1.22
SMG1-210ENST00000565224 FAM149B1Q96BN6 582 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 FCRL3Q96P31 734 aaPredicted RBP7.43□□□□□ -1.22
SMG1-210ENST00000565224 C16orf70Q9BSU1 422 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 TRIM4Q9C037 500 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 KLHL4Q9C0H6 718 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 DNAI2Q9GZS0 605 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 SNX25Q9H3E2 840 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 PRDM12Q9H4Q4 367 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 LRRC40Q9H9A6 602 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 COG4Q9H9E3 785 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 ZNF358Q9NW07 568 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 ARHGAP26Q9UNA1 814 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 POMPQ9Y244 141 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 EVPLQ92817 2033 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 PLXNA1Q9UIW2 1896 aa7.43□□□□□ -1.22
SMG1-210ENST00000565224 LOC100653049A0A140TA62 436 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 KPNA7A9QM74 516 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 XPO1O14980 1071 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 DCXO43602 365 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 CREB3O43889 395 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 RNASEH1O60930 286 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 CAPN15O75808 1086 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 KRT34O76011 436 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 SORBS2O94875 1100 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 MPOP05164 745 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 COX4I1P13073 169 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 ACAT1P24752 427 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 LMO2P25791 158 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 HOXA11P31270 313 aaPredicted RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 GMPRP36959 345 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 POLE2P56282 527 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 ADIGQ0VDE8 80 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 DPYSQ14117 519 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 PAFAH1B3Q15102 231 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 RBBP5Q15291 538 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 KIZQ2M2Z5 673 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 DCAF6Q58WW2 860 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 METTL21CQ5VZV1 264 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 TAPT1Q6NXT6 567 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 PID1Q7Z2X4 250 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 STRA8Q7Z7C7 330 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 HPS6Q86YV9 775 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 ST13P4Q8IZP2 240 aaPredicted RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 TNS4Q8IZW8 715 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 GPC2Q8N158 579 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 PLD6Q8N2A8 252 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 ZNF781Q8N8C0 355 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 GDPD5Q8WTR4 605 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 ZNF669Q96BR6 464 aaPredicted RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 KCNK16Q96T55 309 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 RTKNQ9BST9 563 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 EIF2AQ9BY44 585 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 TMPRSS4Q9NRS4 437 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 BFARQ9NZS9 450 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 KLHL8Q9P2G9 620 aaPredicted RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 ADAMTS6Q9UKP5 1117 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 UBQLN1Q9UMX0 589 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 DICER1Q9UPY3 1922 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 HTTP42858 3142 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 SYNJ2BP-COX16A0A087WUM0 186 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 A0A096LPK6 155 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 ADM5C9JUS6 153 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 E9PBE3 544 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 G3V2L1 256 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 H3BRB1 525 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 EEF2KO00418 725 aaKnown RBP7.42□□□□□ -1.22
SMG1-210ENST00000565224 PIRO00625 290 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 DCLK1O15075 740 aa7.42□□□□□ -1.22
SMG1-210ENST00000565224 ZBTB14O43829 449 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms