RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SEC24DO94855 1032 aaPredicted RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 VNN1O95497 513 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 OXSR1O95747 527 aaPredicted RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 MAPTP10636 758 aaKnown RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 ZNF26P17031 533 aaPredicted RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 ALDH3B2P48448 385 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 BCAP31P51572 246 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 BNIP3Q12983 259 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 ITGA7Q13683 1181 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 MGAT5BQ3V5L5 792 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 DSELQ8IZU8 1212 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 MFSD14AQ96MC6 490 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 HNRNPABQ99729 332 aaKnown RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 EXOC7Q9UPT5 735 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 NR2E3Q9Y5X4 410 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 CBFA2T3O75081 653 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 PSMA2P25787 234 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 CRHR1P34998 444 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 TCF7P36402 384 aaPredicted RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 CYP2A13Q16696 494 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 FGD3Q5JSP0 725 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 GJC2Q5T442 439 aaPredicted RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 CAND1Q86VP6 1230 aaKnown RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 CROCCP3Q8IVE0 287 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 ZNF781Q8N8C0 355 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 COPS5Q92905 334 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 CYP26B1Q9NR63 512 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 SORCS3Q9UPU3 1222 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 SOWAHBA6NEL2 793 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 NDUFB5O43674 189 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 H6PDO95479 791 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 CST3P01034 146 aaPredicted RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 TNFSF9P41273 254 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 CCR10P46092 362 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 KCNJ11Q14654 390 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 PCLAFQ15004 111 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 TMEM198Q66K66 360 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 HACE1Q8IYU2 909 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 FAM110BQ8TC76 370 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 RCN3Q96D15 328 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 PLEKHA8Q96JA3 519 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 TCHPQ9BT92 498 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 GCOM2Q9BZD3 368 aaPredicted RBP16.67■□□□□ 0.26
LINC00554-201ENST00000564841 ZNF302Q9NR11 478 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 ZNHIT2Q9UHR6 403 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 CORINQ9Y5Q5 1042 aa16.67■□□□□ 0.26
LINC00554-201ENST00000564841 PHIPQ8WWQ0 1821 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 LRCH4O75427 683 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 KDELR1P24390 212 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 GABRB3P28472 473 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 GRM5P41594 1212 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 OAZ1P54368 228 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 CUL2Q13617 745 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 ZNF423Q2M1K9 1284 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 KCNT2Q6UVM3 1135 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 ANKRD13AQ8IZ07 590 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 UBR7Q8N806 425 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 TMEM102Q8N9M5 508 aaPredicted RBP16.66■□□□□ 0.26
LINC00554-201ENST00000564841 ADCY4Q8NFM4 1077 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 LRTOMTQ8WZ04 291 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 THAP11Q96EK4 314 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 KIAA1522Q9P206 1035 aaPredicted RBP16.66■□□□□ 0.26
LINC00554-201ENST00000564841 FBXO40Q9UH90 709 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 PPP2R3BQ9Y5P8 575 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 GNAO1P09471 354 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 UGT1A6P19224 532 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 UGT1A1P22309 533 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 UGT1A4P22310 534 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 UBA1P22314 1058 aaKnown RBP16.66■□□□□ 0.26
LINC00554-201ENST00000564841 UGT1A3P35503 534 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 UGT1A5P35504 534 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
LINC00554-201ENST00000564841 KRT80Q6KB66 452 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 ZNF677Q86XU0 584 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 FBXO16Q8IX29 292 aaPredicted RBP16.66■□□□□ 0.26
LINC00554-201ENST00000564841 KCTD6Q8NC69 237 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 GFM2Q969S9 779 aaKnown RBP16.66■□□□□ 0.26
LINC00554-201ENST00000564841 CIB1Q99828 191 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 NUF2Q9BZD4 464 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 KLC2Q9H0B6 622 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 PCDHAC1Q9H158 963 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 SACM1LQ9NTJ5 587 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 TBC1D23Q9NUY8 699 aa16.66■□□□□ 0.26
LINC00554-201ENST00000564841 H7C0C1 242 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 KRT38O76015 456 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 IDO1P14902 403 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 CKMT2P17540 419 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 ATP5OP48047 213 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 GHRHRQ02643 423 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 C16orf87Q6PH81 154 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 BBS12Q6ZW61 710 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 ATXN7L3BQ96GX2 97 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 SLC4A5Q9BY07 1137 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 TMEM216Q9P0N5 145 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 AGO2Q9UKV8 859 aaKnown RBP16.65■□□□□ 0.26
LINC00554-201ENST00000564841 SPATA31C2B4DYI2 1134 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 H3BNH8 94 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 TPP1O14773 563 aa16.65■□□□□ 0.26
LINC00554-201ENST00000564841 ZBED1O96006 694 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms