RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SSU72Q9NP77 194 aaKnown RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 DDIT4Q9NX09 232 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 NSMCE4AQ9NXX6 385 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 PSMD12O00232 456 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 NCAM1P13591 858 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 PSMB4P28070 264 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 LRPAP1P30533 357 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 S100A5P33763 92 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 SFSWAPQ12872 951 aaKnown RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 PTP4A2Q12974 167 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 PACS1Q6VY07 963 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 NANOGNBQ7Z5D8 188 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 SCN4BQ8IWT1 228 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 ATPAF2Q8N5M1 289 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 RIN3Q8TB24 985 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 ITFG2Q969R8 447 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 RNF145Q96MT1 663 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 LGMNQ99538 433 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 CPNE1Q99829 537 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 ACE2Q9BYF1 805 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 NOL6Q9H6R4 1146 aaKnown RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 FAM198AQ9UFP1 575 aa12.87□□□□□ -0.35
COMMD4-209ENST00000564068 RBMX2Q9Y388 322 aaKnown RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 AFDNP55196 1824 aaKnown RBP12.87□□□□□ -0.35
COMMD4-209ENST00000564068 SUPT3HB4E1H0 165 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 RNASEH1O60930 286 aaKnown RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 CST3P01034 146 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 CRHR1P34998 444 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 CCNA1P78396 465 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 GTF2H3Q13889 308 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 KIZQ2M2Z5 673 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 RGS21Q2M5E4 152 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 SAMD4BQ5PRF9 694 aaKnown RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 TWF2Q6IBS0 349 aaKnown RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 STYK1Q6J9G0 422 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 MPZL3Q6UWV2 235 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 CAMK1DQ8IU85 385 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 ADCY4Q8NFM4 1077 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 URGCPQ8TCY9 931 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 LENG9Q96B70 501 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 SNRNP25Q9BV90 132 aaKnown RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 LIN28AQ9H9Z2 209 aaKnown RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 HACD3Q9P035 362 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 MYH13Q9UKX3 1938 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 IGLV3-22A0A075B6J6 115 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 SPDYE2BA6NHP3 402 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 TIPRLO75663 272 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 SPDYE6P0CI01 402 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 T-ENOLP0DO92 83 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 TSPAN8P19075 237 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 KLRC2P26717 231 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 ADSSP30520 456 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 PPARGP37231 505 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 MTTPP55157 894 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 RALGDSQ12967 914 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 TRIM60Q495X7 471 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 BNIPLQ7Z465 357 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 RP9Q8TA86 221 aaKnown RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 TSPAN17Q96FV3 270 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 CERS2Q96G23 380 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 BTBD9Q96Q07 612 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 CLK4Q9HAZ1 481 aaKnown RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 TIMMDC1Q9NPL8 285 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 DPP3Q9NY33 737 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 KPNA4O00629 521 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 STAG3L1P0CL83 205 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 MPSTP25325 297 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 CHRNB3Q05901 458 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 RHBDF2Q6PJF5 856 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 DPP9Q86TI2 863 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 BSNDQ8WZ55 320 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 CD101Q93033 1021 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 CELF6Q96J87 481 aaKnown RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 EGFL8Q99944 293 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 GLIS2Q9BZE0 524 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 SNX15Q9NRS6 342 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 PNPLA3Q9NST1 481 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 ATAD3AQ9NVI7 634 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 EGFL7Q9UHF1 273 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 MYPNQ86TC9 1320 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 E5RI56 91 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 TYROBPO43914 113 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 DDNO94850 711 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 MPOP05164 745 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 CCDC85BQ15834 202 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-209ENST00000564068 PLEKHO2Q8TD55 490 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 HSPBAP1Q96EW2 488 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 COPG2Q9UBF2 871 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 VTI1BQ9UEU0 232 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 ATP8B3O60423 1300 aa12.86□□□□□ -0.35
COMMD4-209ENST00000564068 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 H3BSA7 217 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CBFA2T3O75081 653 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 LDLRP01130 860 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 HNRNPLP14866 589 aaKnown RBP eCLIP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 LSM3P62310 102 aaKnown RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 KLHDC10Q6PID8 442 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CCDC117Q8IWD4 279 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms