RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SLC26A9Q7LBE3 791 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 GBP4Q96PP9 640 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 PRMT1Q99873 361 aaKnown RBP18.25■□□□□ 0.51
NME3-205ENST00000563854 SIK2Q9H0K1 926 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 VPS16Q9H269 839 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 VANGL2Q9ULK5 521 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 NCKAP1Q9Y2A7 1128 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 A0A1B0GVM2 712 aa18.24■□□□□ 0.51
NME3-205ENST00000563854 TCAF2A6NFQ2 919 aa18.24■□□□□ 0.51
NME3-205ENST00000563854 TPM2P07951 284 aa18.24■□□□□ 0.51
NME3-205ENST00000563854 SRPRAP08240 638 aaKnown RBP18.24■□□□□ 0.51
NME3-205ENST00000563854 UCHL3P15374 230 aa18.24■□□□□ 0.51
NME3-205ENST00000563854 MZF1P28698 734 aaPredicted RBP18.24■□□□□ 0.51
NME3-205ENST00000563854 NOS2P35228 1153 aa18.24■□□□□ 0.51
NME3-205ENST00000563854 SIM1P81133 766 aaPredicted RBP18.24■□□□□ 0.51
NME3-205ENST00000563854 ZBTB16Q05516 673 aa18.24■□□□□ 0.51
NME3-205ENST00000563854 EIF4EBP2Q13542 120 aaPredicted RBP18.24■□□□□ 0.51
NME3-205ENST00000563854 FAM102AQ5T9C2 384 aaPredicted RBP18.24■□□□□ 0.51
NME3-205ENST00000563854 TTC39BQ5VTQ0 682 aaPredicted RBP18.24■□□□□ 0.51
NME3-205ENST00000563854 FBXL22Q6P050 247 aa18.24■□□□□ 0.51
NME3-205ENST00000563854 MMAAQ8IVH4 418 aaKnown RBP18.24■□□□□ 0.51
NME3-205ENST00000563854 RSPH9Q9H1X1 276 aaPredicted RBP18.24■□□□□ 0.51
NME3-205ENST00000563854 SLCO3A1Q9UIG8 710 aa18.24■□□□□ 0.51
NME3-205ENST00000563854 EPG5Q9HCE0 2579 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 ACACBO00763 2458 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 EDDM13A0A1B0GTR0 161 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 GOLGA8SH3BPF8 625 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 MID1O15344 667 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 TOP3BO95985 862 aaKnown RBP18.23■□□□□ 0.51
NME3-205ENST00000563854 TFE3P19532 575 aaPredicted RBP18.23■□□□□ 0.51
NME3-205ENST00000563854 NNMTP40261 264 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 MATKP42679 507 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 PSMD8P48556 350 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 KLK7P49862 253 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 IRAK1P51617 712 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 AUHQ13825 339 aaKnown RBP18.23■□□□□ 0.51
NME3-205ENST00000563854 CST6Q15828 149 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 C2CD6Q53TS8 623 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 NOP9Q86U38 636 aaKnown RBP18.23■□□□□ 0.51
NME3-205ENST00000563854 ERICH1Q86X53 443 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 ZDHHC17Q8IUH5 632 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 GPT2Q8TD30 523 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 IGSF8Q969P0 613 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 PCED1AQ9H1Q7 454 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 PABPC3Q9H361 631 aaKnown RBP18.23■□□□□ 0.51
NME3-205ENST00000563854 PIGVQ9NUD9 493 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 DNAAF2Q9NVR5 837 aaKnown RBP18.23■□□□□ 0.51
NME3-205ENST00000563854 FBXL12Q9NXK8 326 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.23■□□□□ 0.51
NME3-205ENST00000563854 STAP1Q9ULZ2 295 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 HS3ST4Q9Y661 456 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 SLCO1B1Q9Y6L6 691 aa18.23■□□□□ 0.51
NME3-205ENST00000563854 ASCC3Q8N3C0 2202 aaKnown RBP18.23■□□□□ 0.51
NME3-205ENST00000563854 A0A1B0GVT2 93 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 A0A1W2PP55 124 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 F8VZ95 297 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 PAGE1O75459 146 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 RNASEH2AO75792 299 aaKnown RBP18.22■□□□□ 0.51
NME3-205ENST00000563854 MMEP08473 750 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 CD59P13987 128 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 SHC2P98077 582 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 DEUP1Q05D60 604 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 ST3GAL2Q16842 350 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 CT47A1Q5JQC4 288 aaPredicted RBP18.22■□□□□ 0.51
NME3-205ENST00000563854 C9orf64Q5T6V5 341 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 OTUD1Q5VV17 481 aaPredicted RBP18.22■□□□□ 0.51
NME3-205ENST00000563854 CXorf57Q6NSI4 855 aaKnown RBP18.22■□□□□ 0.51
NME3-205ENST00000563854 LRSAM1Q6UWE0 723 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 CLEC17AQ6ZS10 378 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 SND1Q7KZF4 910 aaKnown RBP eCLIP18.22■□□□□ 0.516e-7■■□□□ 12.7
NME3-205ENST00000563854 PIP4P1Q86T03 277 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 STK40Q8N2I9 435 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 MSANTD4Q8NCY6 345 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 ZNF397Q8NF99 534 aaPredicted RBP18.22■□□□□ 0.51
NME3-205ENST00000563854 ENOX1Q8TC92 643 aaKnown RBP18.22■□□□□ 0.51
NME3-205ENST00000563854 BIRC7Q96CA5 298 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 C18orf8Q96DM3 657 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 CAMK1GQ96NX5 476 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 OMDQ99983 421 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 NAA15Q9BXJ9 866 aaKnown RBP18.22■□□□□ 0.51
NME3-205ENST00000563854 ZDHHC5Q9C0B5 715 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 TKTL2Q9H0I9 626 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 IL21RQ9HBE5 538 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 SGK2Q9HBY8 427 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 FAM207AQ9NSI2 230 aaPredicted RBP18.22■□□□□ 0.51
NME3-205ENST00000563854 SERGEFQ9UGK8 458 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.22■□□□□ 0.51
NME3-205ENST00000563854 SNX10Q9Y5X0 201 aa18.22■□□□□ 0.51
NME3-205ENST00000563854 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.21■□□□□ 0.51
NME3-205ENST00000563854 TARSL2A2RTX5 802 aaKnown RBP18.21■□□□□ 0.51
NME3-205ENST00000563854 SH3BP5O60239 455 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 GFPT2O94808 682 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 ADCY5O95622 1261 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 VAV1P15498 845 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 CSNK1EP49674 416 aaKnown RBP18.21■□□□□ 0.51
NME3-205ENST00000563854 ZNF177Q13360 481 aaPredicted RBP18.21■□□□□ 0.51
NME3-205ENST00000563854 SLC12A1Q13621 1099 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 KRT31Q15323 416 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 ACCSLQ4AC99 568 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 FKBP15Q5T1M5 1219 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms