RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 DTLQ9NZJ0 730 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 BFARQ9NZS9 450 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 COMMD3-BMI1R4GMX3 469 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 A0A0A0MRY4 1105 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 HNRNPRO43390 633 aaKnown RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 ZBTB14O43829 449 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 SPRP35270 261 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 SNX16P57768 344 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 IRF9Q00978 393 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 Q3C1V9 767 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 BNC2Q6ZN30 1099 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 PQLC1Q8N2U9 271 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 ACTRT2Q8TDY3 377 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 RCN3Q96D15 328 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 SPATA13Q96N96 652 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 KCTD15Q96SI1 283 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 ZNF670Q9BS34 389 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 C20orf96Q9NUD7 363 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 STK32BQ9NY57 414 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 DNAJB4Q9UDY4 337 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 LZTS1Q9Y250 596 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 MRPL42Q9Y6G3 142 aaKnown RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 STX16-NPEPL1H3BU86 382 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 XPO1O14980 1071 aaKnown RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 PHGDHO43175 533 aaKnown RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 ONECUT3O60422 494 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 CCNT2O60583 730 aaKnown RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 SUPT3HO75486 399 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 CHRNGP07510 517 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 PGAM1P18669 254 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 C6orf52Q5T4I8 152 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 TMEM198Q66K66 360 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 POTEAQ6S8J7 498 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 LCLAT1Q6UWP7 414 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 CYP4V2Q6ZWL3 525 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 ZNF534Q76KX8 674 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 MAVSQ7Z434 540 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 TTC30AQ86WT1 665 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 REPS2Q8NFH8 660 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 TBCBQ99426 244 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 AGAP2Q99490 1192 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 ILKAPQ9H0C8 392 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 GBA2Q9HCG7 927 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 ADCY6O43306 1168 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 GCATO75600 419 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 ARIH2O95376 493 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 C1QAP02745 245 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 SPATA31D3P0C874 917 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 TXNP10599 105 aaKnown RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 L1CAMP32004 1257 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 GRIA2P42262 883 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 OAZ1P54368 228 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 NRF1Q16656 503 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 SLC10A6Q3KNW5 377 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 IL31Q6EBC2 164 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 LAYNQ6UX15 382 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 SPATA31D4Q6ZUB0 917 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 RBM12BQ8IXT5 1001 aaKnown RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 TRIML2Q8N7C3 387 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 KYQ8NBH2 561 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 BHLHE22Q8NFJ8 381 aaPredicted RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 PPWD1Q96BP3 646 aaKnown RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 CERS2Q96G23 380 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 SEMA6AQ9H2E6 1030 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 ANLNQ9NQW6 1124 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 IARS2Q9NSE4 1012 aaKnown RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 AP4B1Q9Y6B7 739 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 MFSD11O43934 449 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 CAPN15O75808 1086 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 THRAP10827 490 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 TPSB2P20231 275 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 FGFR3P22607 806 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 PIK3R1P27986 724 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 TNFAIP2Q03169 654 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 TPSAB1Q15661 275 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 MAP7D1Q3KQU3 841 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 SLC9A4Q6AI14 798 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 SPATA6LQ8N4H0 392 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 DNERQ8NFT8 737 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 MAPK15Q8TD08 544 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 P2RY11Q96G91 374 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 PRDM12Q9H4Q4 367 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 PRMT7Q9NVM4 692 aaPredicted RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 GTSE1Q9NYZ3 720 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 ZNF711Q9Y462 761 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 SOWAHBA6NEL2 793 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 C19orf81C9J6K1 198 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 TRIM13O60858 407 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 ENDOD1O94919 500 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 PIGNO95427 931 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 XRCC1P18887 633 aaPredicted RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 NAGLUP54802 743 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 CYLC2Q14093 348 aaPredicted RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 C4orf22Q6V702 233 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 KDELC2Q7Z4H8 507 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 ACMSDQ8TDX5 336 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 USP33Q8TEY7 942 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 437.9 ms