RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 ACADMP11310 421 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 MZF1P28698 734 aaPredicted RBP16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 COPAP53621 1224 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 ARHGAP8P85298 464 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 PTP4A2Q12974 167 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 ZNF177Q13360 481 aaPredicted RBP16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 NFKBIBQ15653 356 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 ASIC2Q16515 512 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 C15orf59Q2T9L4 293 aaPredicted RBP16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 BRMS1LQ5PSV4 323 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 PLA2G2CQ5R387 149 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 SH3PXD2AQ5TCZ1 1133 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 SLC36A4Q6YBV0 504 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 FAM124AQ86V42 546 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 BAP1Q92560 729 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 RPL10LQ96L21 214 aaKnown RBP16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 PRSS16Q9NQE7 514 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 ITM2CQ9NQX7 267 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 RXFP3Q9NSD7 469 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 SUN2Q9UH99 717 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 SLCO3A1Q9UIG8 710 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 CDV3Q9UKY7 258 aaKnown RBP16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 ERVW-1Q9UQF0 538 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 PAXBP1Q9Y5B6 917 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 SPTBN4Q9H254 2564 aa16.08■□□□□ 0.16
AC009088.3-201ENST00000563605 A0A1B0GVM2 712 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 A0A1W2PQC6 194 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 TCAF2A6NFQ2 919 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 TTC34A8MYJ7 566 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 PATE3B3GLJ2 98 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 AP5Z1O43299 807 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 CNTN5O94779 1100 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 ASLP04424 464 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 CALB1P05937 261 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 KRT3P12035 628 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 ITPKAP23677 461 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 SDC4P31431 198 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 RDXP35241 583 aaKnown RBP16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 RFC1P35251 1148 aaPredicted RBP16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 UBASH3AP57075 661 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 ECT2LQ008S8 904 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 MTA1Q13330 715 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 CAMK2GQ13555 558 aaPredicted RBP16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 PLEKHG6Q3KR16 790 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 CCDC14Q49A88 953 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 TTC39BQ5VTQ0 682 aaPredicted RBP16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 SFMBT2Q5VUG0 894 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 RNF219Q5W0B1 726 aaPredicted RBP16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 LYSMD4Q5XG99 296 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 LRRC31Q6UY01 552 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 PHF13Q86YI8 300 aaPredicted RBP16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 OR2T3Q8NH03 318 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 PGAP3Q96FM1 320 aaPredicted RBP16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 TOE1Q96GM8 510 aaKnown RBP16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 MRGPRX3Q96LB0 322 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 SELENOOQ9BVL4 669 aa16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 ATXN2Q99700 1313 aaKnown RBP16.07■□□□□ 0.16
AC009088.3-201ENST00000563605 KHNYNO15037 678 aaKnown RBP16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 CD6P30203 668 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 STK19P49842 368 aaPredicted RBP16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 TPMTP51580 245 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 ZNF33AQ06730 810 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 ALFQ53S48 1182 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 ACAD10Q6JQN1 1059 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 DNAAF5Q86Y56 855 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 OR52K2Q8NGK3 314 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 CPLX3Q8WVH0 158 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 MYO19Q96H55 970 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 GPR174Q9BXC1 333 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 TSPY26PQ9H489 355 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 TMEM74BQ9NUR3 256 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 TAS2R14Q9NYV8 317 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 MPP6Q9NZW5 540 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 SPAG17Q6Q759 2223 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 THADAQ6YHU6 1953 aa16.06■□□□□ 0.16
AC009088.3-201ENST00000563605 DCDC2BA2VCK2 349 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 C2CD4BA6NLJ0 364 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 FOXD2O60548 495 aaPredicted RBP16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 SIN3BO75182 1162 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 CLDN11O75508 207 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 SKILP12757 684 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 CDH4P55283 916 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 RPS14P62263 151 aaKnown RBP16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 SLC12A1Q13621 1099 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 ACCSLQ4AC99 568 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 CXorf57Q6NSI4 855 aaKnown RBP16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 DNAJC24Q6P3W2 148 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 WDR59Q6PJI9 974 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 MON1BQ7L1V2 547 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 ARCQ7LC44 396 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 TFAP2DQ7Z6R9 452 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 METTL3Q86U44 580 aaKnown RBP16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 SLC41A1Q8IVJ1 513 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 RGL4Q8IZJ4 473 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 GANCQ8TET4 914 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 C1orf74Q96LT6 269 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 HSPA12BQ96MM6 686 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 FEM1AQ9BSK4 669 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 MAGEB5Q9BZ81 275 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms