RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SHBQ15464 509 aa19.34■□□□□ 0.69
NME3-204ENST00000563498 CARNMT1Q8N4J0 409 aa19.34■□□□□ 0.69
NME3-204ENST00000563498 DQX1Q8TE96 717 aaKnown RBP19.34■□□□□ 0.69
NME3-204ENST00000563498 SLC39A13Q96H72 371 aa19.34■□□□□ 0.69
NME3-204ENST00000563498 CNDP2Q96KP4 475 aaKnown RBP19.34■□□□□ 0.69
NME3-204ENST00000563498 ZSWIM1Q9BR11 485 aa19.34■□□□□ 0.69
NME3-204ENST00000563498 GDF3Q9NR23 364 aa19.34■□□□□ 0.69
NME3-204ENST00000563498 AASDHPPTQ9NRN7 309 aa19.34■□□□□ 0.69
NME3-204ENST00000563498 ZDHHC9Q9Y397 364 aa19.34■□□□□ 0.69
NME3-204ENST00000563498 A0A1W2PR77 199 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 M0QYV0 167 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 PLK4O00444 970 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 PIK3R2O00459 728 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 ADH1BP00325 375 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 FYNP06241 537 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 GOT1P17174 413 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 C5AR1P21730 350 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 ABCG1P45844 678 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 ARRB1P49407 418 aaPredicted RBP19.33■□□□□ 0.68
NME3-204ENST00000563498 ECT2LQ008S8 904 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 LRRC63Q05C16 580 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 SLC45A4Q5BKX6 768 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 FSCBQ5H9T9 825 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 PRAMEF14Q5SWL7 426 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 C6orf118Q5T5N4 469 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 ZNF658Q5TYW1 1059 aaPredicted RBP19.33■□□□□ 0.68
NME3-204ENST00000563498 ANKRD40Q6AI12 368 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 SND1Q7KZF4 910 aaKnown RBP eCLIP19.33■□□□□ 0.686e-7■■□□□ 12.7
NME3-204ENST00000563498 BEND5Q7L4P6 421 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 CLEC4CQ8WTT0 213 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 MYEOVQ96EZ4 313 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 NT5C1BQ96P26 610 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 GSDMAQ96QA5 445 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 FAM129BQ96TA1 746 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 NUCKS1Q9H1E3 243 aaKnown RBP19.33■□□□□ 0.68
NME3-204ENST00000563498 ERVMER34-1Q9H9K5 563 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 PCDHB4Q9Y5E5 795 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 ATP6V1DQ9Y5K8 247 aa19.33■□□□□ 0.68
NME3-204ENST00000563498 TTC34A8MYJ7 566 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 SART1O43290 800 aaKnown RBP19.32■□□□□ 0.68
NME3-204ENST00000563498 JUPP14923 745 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 EPHA8P29322 1005 aaPredicted RBP19.32■□□□□ 0.68
NME3-204ENST00000563498 RPL34P49207 117 aaKnown RBP19.32■□□□□ 0.68
NME3-204ENST00000563498 FMO5P49326 533 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 ACADVLP49748 655 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 ADPRHP54922 357 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 PNOCQ13519 176 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 DCAF6Q58WW2 860 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 MMS22LQ6ZRQ5 1243 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 OXR1Q8N573 874 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 AADATQ8N5Z0 425 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 TRIM62Q9BVG3 475 aa19.32■□□□□ 0.68
NME3-204ENST00000563498 GTPBP4Q9BZE4 634 aaKnown RBP19.32■□□□□ 0.68
NME3-204ENST00000563498 METTL14Q9HCE5 456 aaKnown RBP19.32■□□□□ 0.68
NME3-204ENST00000563498 RNF225M0QZC1 329 aaPredicted RBP19.31■□□□□ 0.68
NME3-204ENST00000563498 LATO43561 262 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 CTSOP43234 321 aaPredicted RBP19.31■□□□□ 0.68
NME3-204ENST00000563498 RXRGP48443 463 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 PMS1P54277 932 aaKnown RBP19.31■□□□□ 0.68
NME3-204ENST00000563498 NXPH1P58417 271 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 DNAJC3Q13217 504 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 ILKQ13418 452 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 ELAVL3Q14576 367 aaKnown RBP19.31■□□□□ 0.68
NME3-204ENST00000563498 RNF219Q5W0B1 726 aaPredicted RBP19.31■□□□□ 0.68
NME3-204ENST00000563498 CFAP52Q8N1V2 620 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 TSC1Q92574 1164 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 CRELD1Q96HD1 420 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 SERAC1Q96JX3 654 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 DCBLD2Q96PD2 775 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 UBL7Q96S82 380 aaPredicted RBP19.31■□□□□ 0.68
NME3-204ENST00000563498 NRSN2Q9GZP1 204 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 MIS12Q9H081 205 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 SLCO3A1Q9UIG8 710 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 CEP83Q9Y592 693 aa19.31■□□□□ 0.68
NME3-204ENST00000563498 TLR4O00206 839 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 WNT9AO14904 365 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 BRD2P25440 801 aaKnown RBP19.3■□□□□ 0.68
NME3-204ENST00000563498 EIF2S3P41091 472 aaKnown RBP19.3■□□□□ 0.68
NME3-204ENST00000563498 PSMD8P48556 350 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 SLC12A1Q13621 1099 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 SFMBT2Q5VUG0 894 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 PPM1KQ8N3J5 372 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 EID2Q8N6I1 236 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 MFSD2AQ8NA29 543 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 OR14C36Q8NHC7 312 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 PTPRN2Q92932 1015 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 FAM131CQ96AQ9 280 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 KDM4CQ9H3R0 1056 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 NAALADL1Q9UQQ1 740 aa19.3■□□□□ 0.68
NME3-204ENST00000563498 NYNRINQ9P2P1 1898 aaKnown RBP19.3■□□□□ 0.68
NME3-204ENST00000563498 KNTC1P50748 2209 aa19.29■□□□□ 0.68
NME3-204ENST00000563498 CBX4O00257 560 aa19.29■□□□□ 0.68
NME3-204ENST00000563498 P4HA2O15460 535 aa19.29■□□□□ 0.68
NME3-204ENST00000563498 APOEP02649 317 aa19.29■□□□□ 0.68
NME3-204ENST00000563498 MZF1P28698 734 aaPredicted RBP19.29■□□□□ 0.68
NME3-204ENST00000563498 NUDT1P36639 197 aa19.29■□□□□ 0.68
NME3-204ENST00000563498 NNMTP40261 264 aa19.29■□□□□ 0.68
NME3-204ENST00000563498 GCNT1Q02742 428 aa19.29■□□□□ 0.68
NME3-204ENST00000563498 CETN1Q12798 172 aa19.29■□□□□ 0.68
NME3-204ENST00000563498 TARDBPQ13148 414 aaKnown RBP eCLIP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms