RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ASAP1Q9ULH1 1129 aa5.6□□□□□ -1.51
LINC00254-201ENST00000563416 ZMYND8Q9ULU4 1186 aaPredicted RBP5.6□□□□□ -1.51
LINC00254-201ENST00000563416 DLEC1Q9Y238 1755 aa5.6□□□□□ -1.51
LINC00254-201ENST00000563416 NRXN2Q9P2S2 1712 aa5.6□□□□□ -1.51
LINC00254-201ENST00000563416 ZNF804BA4D1E1 1349 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 CCDC189A1A4V9 331 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 HNRNPDLO14979 420 aaKnown RBP5.59□□□□□ -1.51
LINC00254-201ENST00000563416 ZSCAN9O15535 394 aaPredicted RBP5.59□□□□□ -1.51
LINC00254-201ENST00000563416 NCK2O43639 380 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 NDST3O95803 873 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 VIPP01282 170 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 EEF1GP26641 437 aaKnown RBP5.59□□□□□ -1.51
LINC00254-201ENST00000563416 GABRB3P28472 473 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 HTR3AP46098 478 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 NEK3P51956 506 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 ZNF268Q14587 947 aaPredicted RBP5.59□□□□□ -1.51
LINC00254-201ENST00000563416 SLC15A2Q16348 729 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 SLC35G1Q2M3R5 365 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 GRAMD1BQ3KR37 738 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 SLC18B1Q6NT16 456 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 YTHDF3Q7Z739 585 aaKnown RBP5.59□□□□□ -1.51
LINC00254-201ENST00000563416 SPICE1Q8N0Z3 855 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 ACRBPQ8NEB7 543 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 EDC3Q96F86 508 aaKnown RBP5.59□□□□□ -1.51
LINC00254-201ENST00000563416 HIC2Q96JB3 615 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 WDR24Q96S15 920 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 PLEKHF1Q96S99 279 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.59□□□□□ -1.51
LINC00254-201ENST00000563416 AS3MTQ9HBK9 375 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 RGL1Q9NZL6 768 aa5.59□□□□□ -1.51
LINC00254-201ENST00000563416 CACNA1SQ13698 1873 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 ARFGEF2Q9Y6D5 1785 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 DNAJC9-AS1A6NH13 148 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 CLIC1O00299 241 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 DSCR3O14972 297 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 RNMTO43148 476 aaKnown RBP5.58□□□□□ -1.52
LINC00254-201ENST00000563416 CA12O43570 354 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 HMGB2P26583 209 aaKnown RBP5.58□□□□□ -1.52
LINC00254-201ENST00000563416 GPC5P78333 572 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 BTKQ06187 659 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 NSUN2Q08J23 767 aaKnown RBP eCLIP5.58□□□□□ -1.52
LINC00254-201ENST00000563416 MTAPQ13126 283 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 DNASE1L3Q13609 305 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 RAPGEF1Q13905 1077 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 MTX3Q5HYI7 312 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 C10orf62Q5T681 223 aaPredicted RBP5.58□□□□□ -1.52
LINC00254-201ENST00000563416 RANBP10Q6VN20 620 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 TTC30AQ86WT1 665 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 FAM186BQ8IYM0 893 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 EFHD1Q9BUP0 239 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 ADGRE3Q9BY15 652 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 SLC29A3Q9BZD2 475 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 MAF1Q9H063 256 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 TM7SF3Q9NS93 570 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 FZD4Q9ULV1 537 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 ANKRD31Q8N7Z5 1873 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 ARFGEF1Q9Y6D6 1849 aa5.58□□□□□ -1.52
LINC00254-201ENST00000563416 N4BP2Q86UW6 1770 aaPredicted RBP5.57□□□□□ -1.52
LINC00254-201ENST00000563416 FAM234BA2RU67 622 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 OR2W5A6NFC9 320 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 PODXLO00592 558 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 HTATSF1O43719 755 aaKnown RBP5.57□□□□□ -1.52
LINC00254-201ENST00000563416 TMIGD3P0DMS9 266 aaPredicted RBP5.57□□□□□ -1.52
LINC00254-201ENST00000563416 DRD1P21728 446 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 JAK3P52333 1124 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 POU5F1BQ06416 359 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 ATP1A4Q13733 1029 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 KCNJ12Q14500 433 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 MAPKAPK3Q16644 382 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 PFKFB3Q16875 520 aaPredicted RBP5.57□□□□□ -1.52
LINC00254-201ENST00000563416 AASDHQ4L235 1098 aaPredicted RBP5.57□□□□□ -1.52
LINC00254-201ENST00000563416 MORN5Q5VZ52 161 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 ARL6IP4Q66PJ3 421 aaKnown RBP5.57□□□□□ -1.52
LINC00254-201ENST00000563416 RAP1GAP2Q684P5 730 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 GRHL2Q6ISB3 625 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 SRLQ86TD4 932 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 CNGA4Q8IV77 575 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 GLIS1Q8NBF1 620 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 IL17REQ8NFR9 667 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 OSR1Q8TAX0 266 aaPredicted RBP5.57□□□□□ -1.52
LINC00254-201ENST00000563416 DEPTORQ8TB45 409 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 EIF3CQ99613 913 aaKnown RBP5.57□□□□□ -1.52
LINC00254-201ENST00000563416 SH2D3AQ9BRG2 576 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 NUDT22Q9BRQ3 303 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 NLRC4Q9NPP4 1024 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 NECTIN3Q9NQS3 549 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 PDGFCQ9NRA1 345 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 TAGLN3Q9UI15 199 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 CA14Q9ULX7 337 aa5.57□□□□□ -1.52
LINC00254-201ENST00000563416 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.56□□□□□ -1.52
LINC00254-201ENST00000563416 SMIM35A0A1B0GVV1 85 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 MMP8P22894 467 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 PBX1P40424 430 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 GSTM5P46439 218 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 BFSP2Q13515 415 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 ITPK1Q13572 414 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 FHL3Q13643 280 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 ZNF626Q68DY1 528 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 ANO7Q6IWH7 933 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 ENAHQ8N8S7 591 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms