RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SLC12A8A0AV02 714 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 BLACEA4D250 179 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 FFAR2O15552 330 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 TNFSF15O95150 251 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 ATP5BP06576 529 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 RALAP11233 206 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 SFTPCP11686 197 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 POLR2EP19388 210 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 CASP4P49662 377 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 SFSWAPQ12872 951 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 TRPC3Q13507 836 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 ZNF667Q5HYK9 610 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 TADA2BQ86TJ2 420 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 UNC93AQ86WB7 457 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 TMEM145Q8NBT3 493 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 OR14C36Q8NHC7 312 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 IFI44Q8TCB0 444 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 MAPK15Q8TD08 544 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 HPS3Q969F9 1004 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 CCDC127Q96BQ5 260 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 PLD4Q96BZ4 506 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 CDK5RAP1Q96SZ6 601 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 OMDQ99983 421 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 FUCA2Q9BTY2 467 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 KLHL11Q9NVR0 708 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 NLGN3Q9NZ94 848 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 MARCH2Q9P0N8 246 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 SEPT3Q9UH03 358 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 ACSL6Q9UKU0 697 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 DMTF1Q9Y222 760 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 CA5BQ9Y2D0 317 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 SDK2Q58EX2 2172 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 ABCA12Q86UK0 2595 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 LRP4O75096 1905 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 TARSL2A2RTX5 802 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 ENO4A6NNW6 628 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 TTC34A8MYJ7 566 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 K7ESM1 405 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 MAGEC1O60732 1142 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 RNASEH1O60930 286 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 PPFIA2O75334 1257 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 KRT38O76015 456 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 C4BPAP04003 597 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 ITGA2BP08514 1039 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 IDEP14735 1019 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 WT1P19544 449 aaPredicted RBP8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 C5AR1P21730 350 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 NUDT1P36639 197 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 CSKP41240 450 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 ASPAP45381 313 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 PSMD8P48556 350 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 METAP1P53582 386 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 ZNF445P59923 1031 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 CLDN10P78369 228 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 INCA1Q0VD86 236 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 KCNMA1Q12791 1236 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 CLCA4Q14CN2 919 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 TGIF1Q15583 401 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 IGFBP7Q16270 282 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 TBR1Q16650 682 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 ZNF699Q32M78 642 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 MCTP1Q6DN14 999 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 USP53Q70EK8 1073 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 EPM2AIP1Q7L775 607 aaPredicted RBP8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 PRPF39Q86UA1 669 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 TRIM69Q86WT6 500 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 KDM1BQ8NB78 822 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 RASSF8Q8NHQ8 419 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 ZNF507Q8TCN5 953 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 HTR3CQ8WXA8 447 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 PTPRN2Q92932 1015 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 TMA16Q96EY4 203 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 CYFIP2Q96F07 1278 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 ARHGAP9Q9BRR9 750 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 SLC25A18Q9H1K4 315 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 KDM4CQ9H3R0 1056 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 USP29Q9HBJ7 922 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 AGPAT3Q9NRZ7 376 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 PANK4Q9NVE7 773 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 GEMIN8Q9NWZ8 242 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 PAXBP1Q9Y5B6 917 aa8.02□□□□□ -1.13
HERPUD1-206ENST00000563343 TBC1D3DA0A087WVF3 549 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 TBC1D3IA0A087WXS9 549 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 A0A087X0B3 334 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 TBC1D3EA0A087X179 549 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 TBC1D3KA0A087X1G2 549 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 EME2A4GXA9 379 aaPredicted RBP8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 TBC1D3FA6NER0 549 aaPredicted RBP8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 TBC1D3LB9A6J9 549 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 PRAMEF26H0Y7S4 382 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 SCAMP1O15126 338 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 CLIC2O15247 247 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 PLRG1O43660 514 aaKnown RBP8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 NEBLO76041 1014 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 GJB6O95452 261 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 LATS1O95835 1130 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 ADH1BP00325 375 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 CENPBP07199 599 aaPredicted RBP8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 TBC1D3HP0C7X1 549 aa8.01□□□□□ -1.13
HERPUD1-206ENST00000563343 THEGLP0DJG4 465 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms