RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 TFRCP02786 760 aaKnown RBP3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 ALDOAP04075 364 aaKnown RBP3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 TK1P04183 234 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC3A2P08195 630 aaKnown RBP3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 CYP21A2P08686 494 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 GRK5P34947 590 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 IDUAP35475 653 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 KRT9P35527 623 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 PAPOLAP51003 745 aaKnown RBP3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 TAS2R50P59544 299 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 MPP1Q00013 466 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 DMWDQ09019 674 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 DCTN1Q14203 1278 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 TOMM20Q15388 145 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 GLE1Q53GS7 698 aaKnown RBP3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 AWAT1Q58HT5 328 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 INTS11Q5TA45 600 aaKnown RBP3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 FAAH2Q6GMR7 532 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 TMEM88Q6PEY1 159 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC39A5Q6ZMH5 540 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 HERC6Q8IVU3 1022 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 ADPRHL1Q8NDY3 354 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 SRFBP1Q8NEF9 429 aaKnown RBP3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 UCMAQ8WVF2 138 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 BARD1Q99728 777 aaKnown RBP3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 NUAK2Q9H093 628 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 UBN1Q9NPG3 1134 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 RASSF1Q9NS23 344 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 ASNSD1Q9NWL6 643 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 IRAK4Q9NWZ3 460 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 SWAP70Q9UH65 585 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC12A4Q9UP95 1085 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 B3GNT3Q9Y2A9 372 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 BTBD3Q9Y2F9 522 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3DA0A087WVF3 549 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3IA0A087WXS9 549 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3EA0A087X179 549 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3KA0A087X1G2 549 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3BA6NDS4 549 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3FA6NER0 549 aaPredicted RBP3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3LB9A6J9 549 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 E7EVH7 732 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 STX16-NPEPL1H3BU86 382 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 STX16O14662 325 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 RRHO14718 337 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TP73O15350 636 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3HP0C7X1 549 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 CPA1P15085 419 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 CERS1P27544 350 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 VPS41P49754 854 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 ACTR2P61160 394 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 MAPK7Q13164 816 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TDGQ13569 410 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 KPNB1Q14974 876 aaKnown RBP3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 SEC23BQ15437 767 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 PFKFB3Q16875 520 aaPredicted RBP3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 LRRC24Q50LG9 513 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 CC2D1BQ5T0F9 858 aaKnown RBP3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 CCDC30Q5VVM6 783 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3GQ6DHY5 549 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3CQ6IPX1 549 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF66Q6ZN08 573 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 C1orf122Q6ZSJ8 110 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 RASGRP2Q7LDG7 609 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 ANKS1BQ7Z6G8 1248 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 NEK8Q86SG6 692 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D1Q86TI0 1168 aaPredicted RBP3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 RFX6Q8HWS3 928 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 TBC1D3Q8IZP1 549 aaPredicted RBP3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 EXD3Q8N9H8 876 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 HTRA1Q92743 480 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 STAMQ92783 540 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 CELF1Q92879 486 aaKnown RBP3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 HVCN1Q96D96 273 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 NEUROD6Q96NK8 337 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 CENPOQ9BU64 300 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 EFHD1Q9BUP0 239 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 RMI1Q9H9A7 625 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 RRP7AQ9Y3A4 280 aaKnown RBP3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 HEMK1Q9Y5R4 338 aaPredicted RBP3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 COPG1Q9Y678 874 aaKnown RBP3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 KAT6BQ8WYB5 2073 aa3.62□□□□□ -1.83
SHCBP1-202ENST00000563219 HNRNPRO43390 633 aaKnown RBP3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 RNF8O76064 485 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 TUBB4AP04350 444 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 ENO1P06733 434 aaKnown RBP3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 HNRNPA1P09651 372 aaKnown RBP eCLIP3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 RFPL3SP0C7P2 107 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 TACR3P29371 465 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 ELF1P32519 619 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 DDIT3P35638 169 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 SOX2P48431 317 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 RBM5P52756 815 aaKnown RBP eCLIP3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 RCAN1P53805 252 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC37A1P57057 533 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 KRTAP10-9P60411 292 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 HSF1Q00613 529 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 UBE3AQ05086 875 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 TRPC3Q13507 836 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms