RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CDH19Q9H159 772 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 ADAMTS10Q9H324 1103 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PRDM12Q9H4Q4 367 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PAPOLBQ9NRJ5 636 aaKnown RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 BFARQ9NZS9 450 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 CDH22Q9UJ99 828 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PPM1HQ9ULR3 514 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PSAT1Q9Y617 370 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 ENO4A6NNW6 628 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 EEF2KO00418 725 aaKnown RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 DCLK1O15075 740 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 MTSS1O43312 755 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 TIMM44O43615 452 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 AP2A1O95782 977 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 APOA4P06727 396 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PDGFRBP09619 1106 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 ZNF286BP0CG31 522 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PIM1P11309 404 aaPredicted RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 HOXD8P13378 290 aaPredicted RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 DNAJB2P25686 324 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 HCAR3P49019 387 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 NPY2RP49146 381 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 TAF6P49848 677 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 SATB1Q01826 763 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 ROR2Q01974 943 aaKnown RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 ITGA9Q13797 1035 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 DPYSQ14117 519 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 SV2CQ496J9 727 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 EPGNQ6UW88 154 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 ZNF467Q7Z7K2 595 aaPredicted RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 PDSS2Q86YH6 399 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 GALNT15Q8N3T1 639 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 NME8Q8N427 588 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 APPL2Q8NEU8 664 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PIP4K2CQ8TBX8 421 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 SLC2A14Q8TDB8 520 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 NTAN1Q96AB6 310 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 C18orf25Q96B23 403 aaPredicted RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 GBP5Q96PP8 586 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 KCNK16Q96T55 309 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 LBHD1Q9BQE6 289 aaPredicted RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 LPIN3Q9BQK8 851 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 CASS4Q9NQ75 786 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 ADARB2Q9NS39 739 aaKnown RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 SLC17A6Q9P2U8 582 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
USB1-207ENST00000563149 ARHGAP26Q9UNA1 814 aa13.4□□□□□ -0.26
USB1-207ENST00000563149 MEI4A8MW99 385 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 CLGNO14967 610 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 SLC22A2O15244 555 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 PEX1O43933 1283 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 ERVK-10P10266 1014 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
USB1-207ENST00000563149 DNAJB1P25685 340 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 MLH1P40692 756 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 NUMBP49757 651 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 ZNF135P52742 658 aaPredicted RBP13.39□□□□□ -0.27
USB1-207ENST00000563149 ASPHQ12797 758 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 PPM1JQ5JR12 505 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 CFAP157Q5JU67 520 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
USB1-207ENST00000563149 MAP3K21Q5TCX8 1036 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 RNF220Q5VTB9 566 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 POTEAQ6S8J7 498 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 ACAD11Q709F0 780 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 CLEC14AQ86T13 490 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 PIGZQ86VD9 579 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 LCA5Q86VQ0 697 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 FBXW8Q8N3Y1 598 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
USB1-207ENST00000563149 RDH11Q8TC12 318 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 WNT8BQ93098 351 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 FAM149B1Q96BN6 582 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 SLC2A13Q96QE2 648 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 KLHL4Q9C0H6 718 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 CXCL16Q9H2A7 254 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 NSMCE4AQ9NXX6 385 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 SEPT10Q9P0V9 454 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
USB1-207ENST00000563149 PDCD11Q14690 1871 aaKnown RBP13.38□□□□□ -0.27
USB1-207ENST00000563149 CASQ2O14958 399 aaPredicted RBP13.38□□□□□ -0.27
USB1-207ENST00000563149 TRIM13O60858 407 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 HUS1O60921 280 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 RECQL4O94761 1208 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 HSPA4LO95757 839 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 GNAT1P11488 350 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 COX4I1P13073 169 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 KCNE1P15382 129 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 NCF2P19878 526 aaPredicted RBP13.38□□□□□ -0.27
USB1-207ENST00000563149 ITGAXP20702 1163 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 LMO2P25791 158 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 ADSLP30566 484 aaPredicted RBP13.38□□□□□ -0.27
USB1-207ENST00000563149 CCNA1P78396 465 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 CCNIQ14094 377 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 DCAF6Q58WW2 860 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 XKR4Q5GH76 650 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 RALGPS1Q5JS13 557 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 OTUD1Q5VV17 481 aaPredicted RBP13.38□□□□□ -0.27
USB1-207ENST00000563149 CWF19L1Q69YN2 538 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms