RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SIGLEC16A6NMB1 481 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 TIMM44O43615 452 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 ADAM23O75077 832 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 ENDOD1O94919 500 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 GYPCP04921 128 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 GZMAP12544 262 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 HLA-FP30511 346 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 SDC4P31431 198 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 RDXP35241 583 aaKnown RBP17.11■□□□□ 0.33
CDT1-202ENST00000562747 P2RY2P41231 377 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 RPS24P62847 133 aaKnown RBP17.11■□□□□ 0.33
CDT1-202ENST00000562747 TRIM14Q14142 442 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 ACBD5Q5T8D3 534 aaPredicted RBP17.11■□□□□ 0.33
CDT1-202ENST00000562747 TTC39BQ5VTQ0 682 aaPredicted RBP17.11■□□□□ 0.33
CDT1-202ENST00000562747 EGFLAMQ63HQ2 1017 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 SDE2Q6IQ49 451 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 ARMCX6Q7L4S7 300 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 KIAA0907Q7Z7F0 614 aaPredicted RBP17.11■□□□□ 0.33
CDT1-202ENST00000562747 PHLDB2Q86SQ0 1253 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 MFN1Q8IWA4 741 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 CCDC117Q8IWD4 279 aaPredicted RBP17.11■□□□□ 0.33
CDT1-202ENST00000562747 AHI1Q8N157 1196 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 EMC1Q8N766 993 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 FIBINQ8TAL6 211 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 RXFP2Q8WXD0 754 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 PIGKQ92643 395 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 MYEOVQ96EZ4 313 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 TKTL2Q9H0I9 626 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 TMEM74BQ9NUR3 256 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 ELOVL2Q9NXB9 296 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 STIM2Q9P246 746 aa17.11■□□□□ 0.33
CDT1-202ENST00000562747 ATXN2Q99700 1313 aaKnown RBP17.11■□□□□ 0.33
CDT1-202ENST00000562747 FAM208BQ5VWN6 2430 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 ADAMTS9Q9P2N4 1935 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 TCRBV5S1A1TA0A578 114 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 PAGE1O75459 146 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 PABPC1P11940 636 aaKnown RBP17.1■□□□□ 0.33
CDT1-202ENST00000562747 SKILP12757 684 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 PDGFRAP16234 1089 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 CSRP1P21291 193 aaKnown RBP17.1■□□□□ 0.33
CDT1-202ENST00000562747 PTGER3P43115 390 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 PTPN9P43378 593 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 UAP1L1Q3KQV9 507 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 RABGAP1LQ5R372 815 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 HGSNATQ68CP4 663 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 SPECC1LQ69YQ0 1117 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 CHPFQ8IZ52 775 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 DEFB124Q8NES8 71 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 JOSD2Q8TAC2 188 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 CPLX3Q8WVH0 158 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 GABRG3Q99928 467 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 POLMQ9NP87 494 aaPredicted RBP17.1■□□□□ 0.33
CDT1-202ENST00000562747 ABCB8Q9NUT2 735 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 TAS2R14Q9NYV8 317 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 THAP10Q9P2Z0 257 aaPredicted RBP17.1■□□□□ 0.33
CDT1-202ENST00000562747 GGA2Q9UJY4 613 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 HS3ST4Q9Y661 456 aa17.1■□□□□ 0.33
CDT1-202ENST00000562747 ASCC3Q8N3C0 2202 aaKnown RBP17.1■□□□□ 0.33
CDT1-202ENST00000562747 CEP192Q8TEP8 1941 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 DDX3XO00571 662 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDT1-202ENST00000562747 ALDH1A2O94788 518 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 LUC7L3O95232 432 aaKnown RBP17.09■□□□□ 0.33
CDT1-202ENST00000562747 ADCY5O95622 1261 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 SERPING1P05155 500 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 CEACAM1P13688 526 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 HOXB2P14652 356 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 CASP14P31944 242 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 RFC1P35251 1148 aaPredicted RBP17.09■□□□□ 0.33
CDT1-202ENST00000562747 CDH18Q13634 790 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 AUHQ13825 339 aaKnown RBP17.09■□□□□ 0.33
CDT1-202ENST00000562747 CCDC14Q49A88 953 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 TDRD12Q587J7 1177 aaKnown RBP17.09■□□□□ 0.33
CDT1-202ENST00000562747 TRIM61Q5EBN2 209 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 TMEM215Q68D42 235 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 FBXL22Q6P050 247 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 DNAJC24Q6P3W2 148 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 CHST9Q7L1S5 443 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 STRADAQ7RTN6 431 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 VPS36Q86VN1 386 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 TMEFF1Q8IYR6 380 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 CFAP52Q8N1V2 620 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 CARNMT1Q8N4J0 409 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 WFDC5Q8TCV5 224 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 HMGB4Q8WW32 186 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 GATA6Q92908 595 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 ACOX2Q99424 681 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 CIPCQ9C0C6 399 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 EVLQ9UI08 416 aaPredicted RBP17.09■□□□□ 0.33
CDT1-202ENST00000562747 PCDH15Q96QU1 1955 aa17.09■□□□□ 0.33
CDT1-202ENST00000562747 MYO18AQ92614 2054 aaKnown RBP17.08■□□□□ 0.33
CDT1-202ENST00000562747 A0A1B0GVM2 712 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 ANKRD62A6NC57 917 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 TCAF2A6NFQ2 919 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 TMCO5BA8MYB1 307 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 RTN2O75298 545 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 GJB6O95452 261 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 GPD1P21695 349 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 RRM1P23921 792 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 CD70P32970 193 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms