RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 DDX56Q9NY93 547 aaKnown RBP13.13□□□□□ -0.31
CDH11-204ENST00000562712 DONSONQ9NYP3 566 aa13.13□□□□□ -0.31
CDH11-204ENST00000562712 MPP6Q9NZW5 540 aa13.13□□□□□ -0.31
CDH11-204ENST00000562712 CWC15Q9P013 229 aaKnown RBP13.13□□□□□ -0.31
CDH11-204ENST00000562712 RCOR3Q9P2K3 495 aaPredicted RBP13.13□□□□□ -0.31
CDH11-204ENST00000562712 CLEC4EQ9ULY5 219 aa13.13□□□□□ -0.31
CDH11-204ENST00000562712 PYCARDQ9ULZ3 195 aa13.13□□□□□ -0.31
CDH11-204ENST00000562712 TBC1D30Q9Y2I9 924 aa13.13□□□□□ -0.31
CDH11-204ENST00000562712 MRPS17Q9Y2R5 130 aaKnown RBP13.13□□□□□ -0.31
CDH11-204ENST00000562712 PCDHA3Q9Y5H8 950 aa13.13□□□□□ -0.31
CDH11-204ENST00000562712 KANSL1LA0AUZ9 987 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 GOLGA6L9A6NEM1 432 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 WASH4PA8MWX3 477 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 EEF2KO00418 725 aaKnown RBP13.12□□□□□ -0.31
CDH11-204ENST00000562712 FGF10O15520 208 aaPredicted RBP13.12□□□□□ -0.31
CDH11-204ENST00000562712 DRD1P21728 446 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 KDELR1P24390 212 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 IL4RP24394 825 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 OR1E1P30953 314 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 CTNNA1P35221 906 aaKnown RBP13.12□□□□□ -0.31
CDH11-204ENST00000562712 ARL4AP40617 200 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 GRIA2P42262 883 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 IRAK1P51617 712 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 TPI1P60174 286 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 GRSF1Q12849 480 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH11-204ENST00000562712 SLC12A1Q13621 1099 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 CDH18Q13634 790 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 ALFQ53S48 1182 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 GRAMD4Q6IC98 578 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 RFX8Q6ZV50 586 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 PEX26Q7Z412 305 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 KIAA0907Q7Z7F0 614 aaPredicted RBP13.12□□□□□ -0.31
CDH11-204ENST00000562712 SETD3Q86TU7 594 aaPredicted RBP13.12□□□□□ -0.31
CDH11-204ENST00000562712 NLRP14Q86W24 1093 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 VSIG1Q86XK7 387 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 MFN1Q8IWA4 741 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 ZNF687Q8N1G0 1237 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 PHTF2Q8N3S3 785 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 CARNMT1Q8N4J0 409 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 TRIM58Q8NG06 486 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 TSC1Q92574 1164 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 LMLNQ96KR4 655 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 CATSPERBQ9H7T0 1116 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 PCDH18Q9HCL0 1135 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 FBRSL1Q9HCM7 1045 aaKnown RBP13.12□□□□□ -0.31
CDH11-204ENST00000562712 TMEM248Q9NWD8 314 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 KIAA1522Q9P206 1035 aaPredicted RBP13.12□□□□□ -0.31
CDH11-204ENST00000562712 ZNF212Q9UDV6 495 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 AMFRQ9UKV5 643 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 NEU3Q9UQ49 428 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 CAPN6Q9Y6Q1 641 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 MYOFQ9NZM1 2061 aa13.12□□□□□ -0.31
CDH11-204ENST00000562712 CCDC66A2RUB6 948 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 MIF4GDA9UHW6 222 aaKnown RBP13.11□□□□□ -0.31
CDH11-204ENST00000562712 ZNF487B1APH4 448 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 H3BRJ5 948 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 DAPK3O43293 454 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 TIMM44O43615 452 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 KAT7O95251 611 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 APODP05090 189 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 GOT1P17174 413 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 CD72P21854 359 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 CTNNA2P26232 953 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 HLA-FP30511 346 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 TNFRSF4P43489 277 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 MAPKAPK2P49137 400 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 PEX5P50542 639 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 PLK1P53350 603 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 CDH6P55285 790 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 DPYSQ14117 519 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 DPYSL3Q14195 570 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 KRT81Q14533 505 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 PON2Q15165 354 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 ODF2Q5BJF6 829 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 FSCBQ5H9T9 825 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 C6orf118Q5T5N4 469 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
CDH11-204ENST00000562712 CXorf57Q6NSI4 855 aaKnown RBP13.11□□□□□ -0.31
CDH11-204ENST00000562712 ZNF783Q6ZMS7 281 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 CIR1Q86X95 450 aaPredicted RBP13.11□□□□□ -0.31
CDH11-204ENST00000562712 KATNAL2Q8IYT4 538 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 RCOR2Q8IZ40 523 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDH11-204ENST00000562712 RTL3Q8N8U3 475 aaKnown RBP13.11□□□□□ -0.31
CDH11-204ENST00000562712 RAPGEF5Q92565 580 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 FAM122AQ96E09 287 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 ALS2CR12Q96Q35 445 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 OSBPL6Q9BZF3 934 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 KCNH6Q9H252 994 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 ARHGEF4Q9NR80 690 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
CDH11-204ENST00000562712 STARD13Q9Y3M8 1113 aa13.11□□□□□ -0.31
CDH11-204ENST00000562712 COL4A3Q01955 1670 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 ILVBLA1L0T0 632 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 TBC1D3BA6NDS4 549 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 C3orf70A6NLC5 250 aaPredicted RBP13.1□□□□□ -0.31
CDH11-204ENST00000562712 FAM170BA6NMN3 283 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 K7EQS6 105 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 TRIM24O15164 1050 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms