RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 KCTD13Q8WZ19 329 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 PTPRN2Q92932 1015 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 ISL2Q96A47 359 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 ZNF333Q96JL9 665 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 SNX27Q96L92 541 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 FGD4Q96M96 766 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 RILPQ96NA2 401 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 OLFM3Q96PB7 478 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 CSPG4P5Q96PW8 444 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 TRIM62Q9BVG3 475 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 OSBPL1AQ9BXW6 950 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 SLC13A1Q9BZW2 595 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 FAM192AQ9GZU8 254 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 RNPEPQ9H4A4 650 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 DHX35Q9H5Z1 703 aaKnown RBP7.69□□□□□ -1.18
CFDP1-202ENST00000562602 C10orf88Q9H8K7 445 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 LRRC40Q9H9A6 602 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 NDE1Q9NXR1 346 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 IL1RAPL1Q9NZN1 696 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 BFARQ9NZS9 450 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 HACD3Q9P035 362 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 PDP2Q9P2J9 529 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 RBPJLQ9UBG7 517 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 NKX1-2Q9UD57 310 aaPredicted RBP7.69□□□□□ -1.18
CFDP1-202ENST00000562602 HMGXB4Q9UGU5 601 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 TRHDEQ9UKU6 1024 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 SOX13Q9UN79 622 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 HBS1LQ9Y450 684 aaKnown RBP7.69□□□□□ -1.18
CFDP1-202ENST00000562602 SNX9Q9Y5X1 595 aa7.69□□□□□ -1.18
CFDP1-202ENST00000562602 FAM237BA0A1B0GVD1 139 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 H3BRB1 525 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 CAPN9O14815 690 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 TIMM44O43615 452 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 HUS1O60921 280 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 ENTPD5O75356 428 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 F9P00740 461 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 PGK2P07205 417 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 IQCF3P0C7M6 154 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 KCNE1P15382 129 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 ALOX15P16050 662 aaPredicted RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 WARSP23381 471 aaKnown RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 GCLCP48506 637 aaPredicted RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 NPY2RP49146 381 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 RGS7P49802 495 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 TAF6P49848 677 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 SERPINB8P50452 374 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 CSE1LP55060 971 aaKnown RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 ACTR3P61158 418 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 IGBP1P78318 339 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 MRPS5P82675 430 aaKnown RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 COG7P83436 770 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 MXRA7P84157 204 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 DEUP1Q05D60 604 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 NIPAL4Q0D2K0 466 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 SNAPC2Q13487 334 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 PAFAH1B3Q15102 231 aaKnown RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 RCN1Q15293 331 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 GRIK4Q16099 956 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 DGKDQ16760 1214 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 ZNF792Q3KQV3 632 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 ARL13BQ3SXY8 428 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 KHDC1Q4VXA5 237 aaKnown RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 FASTKD1Q53R41 847 aaKnown RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 FBXO47Q5MNV8 452 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 MROH9Q5TGP6 573 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 TRNP1Q6NT89 227 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 CASC4Q6P4E1 433 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 PACS1Q6VY07 963 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 CATSPER4Q7RTX7 472 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 LYSMD3Q7Z3D4 306 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 LIMS2Q7Z4I7 341 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 ACOT1Q86TX2 421 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 TTC30AQ86WT1 665 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 NME8Q8N427 588 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 COLGALT1Q8NBJ5 622 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 APPL2Q8NEU8 664 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 GABPB2Q8TAK5 448 aaPredicted RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 TRAPPC12Q8WVT3 735 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 NTAN1Q96AB6 310 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 SPDL1Q96EA4 605 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 TSNARE1Q96NA8 513 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 TRAPPC9Q96Q05 1148 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 ZNF184Q99676 751 aaPredicted RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 HNRNPABQ99729 332 aaKnown RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 MIPEPQ99797 713 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 CCDC106Q9BWC9 280 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 NMUR2Q9GZQ4 415 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 TUT1Q9H6E5 874 aaKnown RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 ALG13Q9NP73 1137 aaKnown RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 PCMTD2Q9NV79 361 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 DDX43Q9NXZ2 648 aaKnown RBP7.68□□□□□ -1.18
CFDP1-202ENST00000562602 DTLQ9NZJ0 730 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 FZD10Q9ULW2 581 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 ANKRD6Q9Y2G4 727 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 PCDHB9Q9Y5E1 797 aa7.68□□□□□ -1.18
CFDP1-202ENST00000562602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.67□□□□□ -1.18
CFDP1-202ENST00000562602 SMIM35A0A1B0GVV1 85 aa7.67□□□□□ -1.18
CFDP1-202ENST00000562602 CDC14CA4D256 554 aa7.67□□□□□ -1.18
CFDP1-202ENST00000562602 CXorf49A8MYA2 514 aaPredicted RBP7.67□□□□□ -1.18
CFDP1-202ENST00000562602 PIRO00625 290 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms