RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 NNTQ13423 1086 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 EIF4EBP2Q13542 120 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 ENPP2Q13822 863 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 AUHQ13825 339 aaKnown RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 C15orf59Q2T9L4 293 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 POM121L1PQ3SYA9 428 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 SH3PXD2AQ5TCZ1 1133 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 BEND5Q7L4P6 421 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 APTXQ7Z2E3 356 aaKnown RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 ERMP1Q7Z2K6 904 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 KIAA0907Q7Z7F0 614 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 SYT12Q8IV01 421 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 ZCCHC9Q8N567 271 aaKnown RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 OR2T3Q8NH03 318 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 JOSD2Q8TAC2 188 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 MYO19Q96H55 970 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 MRGPRX3Q96LB0 322 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 NPY6RQ99463 290 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 MAGEB5Q9BZ81 275 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 TMEM245Q9H330 911 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 ITM2CQ9NQX7 267 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 WSB2Q9NYS7 404 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 KIAA1522Q9P206 1035 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 PILRBQ9UKJ0 227 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 ERVW-1Q9UQF0 538 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 SLCO1B1Q9Y6L6 691 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 CKAP5Q14008 2032 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 TNRC6BQ9UPQ9 1833 aaKnown RBP9.77□□□□□ -0.84
NSMCE1-203ENST00000562039 SYCE3A1L190 88 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 SRGAP2O75044 1071 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 MOCS3O95396 460 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 ENGP17813 658 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 ACSL1P33121 698 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 PSMD8P48556 350 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 SNX16P57768 344 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 CDR2Q01850 454 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 CAMK2GQ13555 558 aaPredicted RBP9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 PLEKHG6Q3KR16 790 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 ACCSLQ4AC99 568 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 ALFQ53S48 1182 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 RABGAP1LQ5R372 815 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 MPP7Q5T2T1 576 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 DCAF12L1Q5VU92 463 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 RNF219Q5W0B1 726 aaPredicted RBP9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 CXorf57Q6NSI4 855 aaKnown RBP9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 TFAP2DQ7Z6R9 452 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 FAM131BQ86XD5 332 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 MMAAQ8IVH4 418 aaKnown RBP9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 STK40Q8N2I9 435 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 RXFP2Q8WXD0 754 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 TTC17Q96AE7 1141 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 NUSAP1Q9BXS6 441 aaKnown RBP9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 C6orf106Q9H6K1 298 aaPredicted RBP9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 WDCPQ9H6R7 721 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 TMEM9BQ9NQ34 198 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 MPP6Q9NZW5 540 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 USP36Q9P275 1121 aaKnown RBP9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 SERGEFQ9UGK8 458 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 STAP1Q9ULZ2 295 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 PLXND1Q9Y4D7 1925 aa9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 MUC22E2RYF6 1773 aaPredicted RBP9.77□□□□□ -0.85
NSMCE1-203ENST00000562039 ASCC3Q8N3C0 2202 aaKnown RBP9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 TMCO5BA8MYB1 307 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 CDX4O14627 284 aaPredicted RBP9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 NPC1O15118 1278 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 MID1O15344 667 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 SNAP91O60641 907 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 FSBPO95073 299 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 DNTTP04053 509 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 CYP1A1P04798 512 aaPredicted RBP9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 SLC2A3P11169 496 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 SDHBP21912 280 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 GABRB2P47870 512 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 CXCR3P49682 368 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF165P49910 485 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 METAP1P53582 386 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 ATXN3P54252 364 aaPredicted RBP9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 ECT2LQ008S8 904 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF177Q13360 481 aaPredicted RBP9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 PSAPL1Q6NUJ1 521 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 LAYNQ6UX15 382 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 SND1Q7KZF4 910 aaKnown RBP eCLIP9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 MSANTD4Q8NCY6 345 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 DEFB124Q8NES8 71 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF397Q8NF99 534 aaPredicted RBP9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 NAP1L5Q96NT1 182 aaPredicted RBP9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 MUC3BQ9H195 1237 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 SUN2Q9UH99 717 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 EIF2B4Q9UI10 523 aaKnown RBP9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 TMEM59LQ9UK28 342 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 SLC6A14Q9UN76 642 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 KNL1Q8NG31 2342 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 CACNA1AO00555 2505 aa9.76□□□□□ -0.85
NSMCE1-203ENST00000562039 A0A1B0GVM2 712 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 A0A1W2PP55 124 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 TCAF2A6NFQ2 919 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 KCNK3O14649 394 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 RNASEH2AO75792 299 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms