RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 ZDHHC14Q8IZN3 488 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 CFAP52Q8N1V2 620 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 RTL3Q8N8U3 475 aaKnown RBP13.03□□□□□ -0.32
CMTM4-203ENST00000561680 ST13P5Q8NFI4 369 aaPredicted RBP13.03□□□□□ -0.32
CMTM4-203ENST00000561680 MAIP1Q8WWC4 291 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 P2RY11Q96G91 374 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 FAM83CQ9BQN1 747 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 RRAGDQ9NQL2 400 aaPredicted RBP13.03□□□□□ -0.32
CMTM4-203ENST00000561680 PRDM6Q9NQX0 595 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 SPHK2Q9NRA0 654 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 THG1LQ9NWX6 298 aaKnown RBP13.03□□□□□ -0.32
CMTM4-203ENST00000561680 MARK1Q9P0L2 795 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 STIM2Q9P246 746 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 MFHAS1Q9Y4C4 1052 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 NUMBLQ9Y6R0 609 aa13.03□□□□□ -0.32
CMTM4-203ENST00000561680 COL6A3P12111 3177 aa13.02□□□□□ -0.32
CMTM4-203ENST00000561680 APOC4-APOC2K7ER74 178 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 MFSD11O43934 449 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 TBL1XO60907 577 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 CLDN11O75508 207 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 NFATC1O95644 943 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 PENKP01210 267 aaPredicted RBP13.02□□□□□ -0.33
CMTM4-203ENST00000561680 APOC2P02655 101 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 CYP17A1P05093 508 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 HOXD9P28356 352 aaPredicted RBP13.02□□□□□ -0.33
CMTM4-203ENST00000561680 SERPINB6P35237 376 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 PAFAH1B1P43034 410 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 MAPKAPK2P49137 400 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 DYNLT1P63172 113 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 GRM2Q14416 872 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 PDGFRLQ15198 375 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 LONRF2Q1L5Z9 754 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 CCDC181Q5TID7 509 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 FYB2Q5VWT5 728 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 TRIM68Q6AZZ1 485 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 TPGS1Q6ZTW0 290 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 TFAP2DQ7Z6R9 452 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 ADGRG2Q8IZP9 1017 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 NPWQ8N729 165 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 IRF7Q92985 503 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 ATP2A3Q93084 1043 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 TMA16Q96EY4 203 aaKnown RBP13.02□□□□□ -0.33
CMTM4-203ENST00000561680 RPP25Q9BUL9 199 aaKnown RBP13.02□□□□□ -0.33
CMTM4-203ENST00000561680 KLC2Q9H0B6 622 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 L2HGDHQ9H9P8 463 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 DONSONQ9NYP3 566 aa13.02□□□□□ -0.33
CMTM4-203ENST00000561680 F5P12259 2224 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 CHADO15335 359 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 LUC7L3O95232 432 aaKnown RBP13.01□□□□□ -0.33
CMTM4-203ENST00000561680 CYBBP04839 570 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 IL9P15248 144 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 ARSAP15289 507 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 PECAM1P16284 738 aaPredicted RBP13.01□□□□□ -0.33
CMTM4-203ENST00000561680 NR2C2P49116 596 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 GBE1Q04446 702 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 CKAP4Q07065 602 aaKnown RBP13.01□□□□□ -0.33
CMTM4-203ENST00000561680 NOMO1Q15155 1222 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 DHCR24Q15392 516 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 LY6G5CQ5SRR4 150 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 AFMIDQ63HM1 303 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 RHBDF2Q6PJF5 856 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 NPNTQ6UXI9 565 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 ADAT2Q7Z6V5 191 aaKnown RBP13.01□□□□□ -0.33
CMTM4-203ENST00000561680 TMEM25Q86YD3 366 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 YAF2Q8IY57 180 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 UMODL1-AS1Q8N2C9 162 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 LZTR1Q8N653 840 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 TTC13Q8NBP0 860 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 DDI1Q8WTU0 396 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 NXPE3Q969Y0 559 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 ZFYVE19Q96K21 471 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 RPGRIP1Q96KN7 1286 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 NOL6Q9H6R4 1146 aaKnown RBP13.01□□□□□ -0.33
CMTM4-203ENST00000561680 HPS4Q9NQG7 708 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 NDFIP2Q9NV92 336 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 DTLQ9NZJ0 730 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 R3HDM2Q9Y2K5 976 aaKnown RBP13.01□□□□□ -0.33
CMTM4-203ENST00000561680 RAD54BQ9Y620 910 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 CKAP5Q14008 2032 aa13.01□□□□□ -0.33
CMTM4-203ENST00000561680 NEDD8-MDP1E9PL57 170 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 ARNTLO00327 626 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 HOXC11O43248 304 aaPredicted RBP13□□□□□ -0.33
CMTM4-203ENST00000561680 ADH1CP00326 375 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 TYRP14679 529 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 OR1E1P30953 314 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 OTUD4Q01804 1114 aaKnown RBP13□□□□□ -0.33
CMTM4-203ENST00000561680 SLC10A2Q12908 348 aaPredicted RBP13□□□□□ -0.33
CMTM4-203ENST00000561680 CYP1B1Q16678 543 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 CXorf57Q6NSI4 855 aaKnown RBP13□□□□□ -0.33
CMTM4-203ENST00000561680 C1orf228Q6PIY5 440 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 SETD3Q86TU7 594 aaPredicted RBP13□□□□□ -0.33
CMTM4-203ENST00000561680 ARHGAP12Q8IWW6 846 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 PRELID2Q8N945 189 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 C12orf50Q8NA57 414 aaPredicted RBP13□□□□□ -0.33
CMTM4-203ENST00000561680 ACTL9Q8TC94 416 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 WFDC5Q8TCV5 224 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 P3H4Q92791 437 aa13□□□□□ -0.33
CMTM4-203ENST00000561680 BHMTQ93088 406 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms