RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CD48P09326 243 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 RHOQP17081 205 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 KDELR1P24390 212 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 IL4RP24394 825 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 EPHB2P29323 1055 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 OR1E1P30953 314 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 ARL4AP40617 200 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 EIF2DP41214 584 aaKnown RBP10.58□□□□□ -0.72
LRRC28-221ENST00000561276 ARSEP51690 589 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 ZNF135P52742 658 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-221ENST00000561276 TPI1P60174 286 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 MESP2Q0VG99 397 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 PDAP1Q13442 181 aaKnown RBP10.58□□□□□ -0.72
LRRC28-221ENST00000561276 KRT81Q14533 505 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 PDK2Q15119 407 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 RNF43Q68DV7 783 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 C1orf228Q6PIY5 440 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 TRIM67Q6ZTA4 783 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 CHST9Q7L1S5 443 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 MFN1Q8IWA4 741 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 MAP7D3Q8IWC1 876 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 PHTF2Q8N3S3 785 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 RAPGEF5Q92565 580 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 EXOC4Q96A65 974 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 TBC1D31Q96DN5 1066 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 MSANTD3Q96H12 275 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 NELL2Q99435 816 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 CALN1Q9BXU9 219 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 RETREG1Q9H6L5 497 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 PCDH18Q9HCL0 1135 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 ARHGEF4Q9NR80 690 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 KLHL11Q9NVR0 708 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 DDX56Q9NY93 547 aaKnown RBP10.58□□□□□ -0.72
LRRC28-221ENST00000561276 KIAA1522Q9P206 1035 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-221ENST00000561276 NDRG2Q9UN36 371 aaKnown RBP10.58□□□□□ -0.72
LRRC28-221ENST00000561276 TBC1D30Q9Y2I9 924 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 PCDHA3Q9Y5H8 950 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 NUP205Q92621 2012 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 KANSL1LA0AUZ9 987 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 CCDC66A2RUB6 948 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 TBC1D3BA6NDS4 549 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 H3BRJ5 948 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 TNFRSF10AO00220 468 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 PSTPIP1O43586 416 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 ZRANB2O95218 330 aaKnown RBP eCLIP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 KAT7O95251 611 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 APODP05090 189 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 AMPD1P23109 780 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 HLA-FP30511 346 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 HOXC13P31276 330 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 CD70P32970 193 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 HTR7P34969 479 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 GRIA2P42262 883 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 PEX5P50542 639 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 KDSRQ06136 332 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 GRSF1Q12849 480 aaKnown RBP eCLIP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 MMRN1Q13201 1228 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 CDH18Q13634 790 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 DPYSL3Q14195 570 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 PREPLQ4J6C6 727 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 ODF2Q5BJF6 829 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 ANKRD20A8PQ5CZ79 823 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 TMEM196Q5HYL7 178 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 GRAMD4Q6IC98 578 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 FSTL4Q6MZW2 842 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 RFX8Q6ZV50 586 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 NUDT18Q6ZVK8 323 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 TFAP2DQ7Z6R9 452 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 KIAA0907Q7Z7F0 614 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 SETD3Q86TU7 594 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 NLRP14Q86W24 1093 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 RCOR2Q8IZ40 523 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 ZNF557Q8N988 423 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 TRIM58Q8NG06 486 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 UBE2Q2Q8WVN8 375 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 TSC1Q92574 1164 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 KRT35Q92764 455 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 TRIM44Q96DX7 344 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 CATSPERBQ9H7T0 1116 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 ABCB8Q9NUT2 735 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 NDFIP2Q9NV92 336 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 TMEM248Q9NWD8 314 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 ZNF212Q9UDV6 495 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 DNAI1Q9UI46 699 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 PACSIN2Q9UNF0 486 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 NEU3Q9UQ49 428 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 SLC27A6Q9Y2P4 619 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 MRPS17Q9Y2R5 130 aaKnown RBP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 MTF2Q9Y483 593 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-221ENST00000561276 CHD5Q8TDI0 1954 aa10.57□□□□□ -0.72
LRRC28-221ENST00000561276 TRIOO75962 3097 aa10.56□□□□□ -0.72
LRRC28-221ENST00000561276 LRRD1A4D1F6 860 aa10.56□□□□□ -0.72
LRRC28-221ENST00000561276 C3orf70A6NLC5 250 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-221ENST00000561276 FAM170BA6NMN3 283 aa10.56□□□□□ -0.72
LRRC28-221ENST00000561276 WASH4PA8MWX3 477 aa10.56□□□□□ -0.72
LRRC28-221ENST00000561276 MIF4GDA9UHW6 222 aaKnown RBP10.56□□□□□ -0.72
LRRC28-221ENST00000561276 PRRT4C9JH25 899 aa10.56□□□□□ -0.72
LRRC28-221ENST00000561276 K7EQS6 105 aa10.56□□□□□ -0.72
LRRC28-221ENST00000561276 FGF10O15520 208 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms