RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TRIM5Q9C035 493 aa14.34□□□□□ -0.11
TPM1-230ENST00000561266 THAP2Q9H0W7 228 aa14.34□□□□□ -0.11
TPM1-230ENST00000561266 MYO1AQ9UBC5 1043 aa14.34□□□□□ -0.11
TPM1-230ENST00000561266 CNOT8Q9UFF9 292 aaKnown RBP14.34□□□□□ -0.11
TPM1-230ENST00000561266 EBF1Q9UH73 591 aa14.34□□□□□ -0.11
TPM1-230ENST00000561266 NEU3Q9UQ49 428 aa14.34□□□□□ -0.11
TPM1-230ENST00000561266 OR51B4Q9Y5P0 310 aa14.34□□□□□ -0.11
TPM1-230ENST00000561266 PLXND1Q9Y4D7 1925 aa14.34□□□□□ -0.11
TPM1-230ENST00000561266 FRYLO94915 3013 aa14.34□□□□□ -0.11
TPM1-230ENST00000561266 NUP205Q92621 2012 aa14.34□□□□□ -0.11
TPM1-230ENST00000561266 NUMA1Q14980 2115 aa14.33□□□□□ -0.11
TPM1-230ENST00000561266 FAM186AA6NE01 2351 aa14.33□□□□□ -0.11
TPM1-230ENST00000561266 EP300Q09472 2414 aaPredicted RBP14.33□□□□□ -0.12
TPM1-230ENST00000561266 RALGAPA1Q6GYQ0 2036 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 IGLV3-10A0A075B6K4 115 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 TCRBV21S2A2A0A5A6 115 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 E9PAM4 449 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 H0Y626 953 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 AXIN1O15169 862 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 TPM3P06753 285 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 ZNF75DP51815 510 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 DGKEP52429 567 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 NRLP54845 237 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 GFPT1Q06210 699 aaPredicted RBP14.33□□□□□ -0.12
TPM1-230ENST00000561266 PITRM1Q5JRX3 1037 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 MANEALQ5VSG8 457 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 CYP4V2Q6ZWL3 525 aaPredicted RBP14.33□□□□□ -0.12
TPM1-230ENST00000561266 SND1Q7KZF4 910 aaKnown RBP eCLIP14.33□□□□□ -0.12
TPM1-230ENST00000561266 CPNE8Q86YQ8 564 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 WFIKKN2Q8TEU8 576 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 HMGB4Q8WW32 186 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 RLN3Q8WXF3 142 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 BTBD6Q96KE9 485 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 C1orf74Q96LT6 269 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 HAPLN3Q96S86 360 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 PEBP4Q96S96 227 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 PACSIN1Q9BY11 444 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 TMEM245Q9H330 911 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 ABHD10Q9NUJ1 306 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 NDFIP2Q9NV92 336 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 GPATCH2LQ9NWQ4 482 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 BZW2Q9Y6E2 419 aaKnown RBP14.33□□□□□ -0.12
TPM1-230ENST00000561266 GON4LQ3T8J9 2241 aa14.33□□□□□ -0.12
TPM1-230ENST00000561266 PIEZO1Q92508 2521 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 A0A1B0GVM2 712 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 TCAF2A6NFQ2 919 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 SRGAP2O75044 1071 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 TCF4P15884 667 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 BCKDHBP21953 392 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 GALCP54803 685 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 CDH18Q13634 790 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 PLEKHG6Q3KR16 790 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 ALKBH5Q6P6C2 394 aaKnown RBP14.32□□□□□ -0.12
TPM1-230ENST00000561266 DCUN1D2Q6PH85 259 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 NUDT18Q6ZVK8 323 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 DRC7Q8IY82 874 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 AHI1Q8N157 1196 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 DCLK2Q8N568 766 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 FAM160A2Q8N612 972 aaPredicted RBP14.32□□□□□ -0.12
TPM1-230ENST00000561266 TC2NQ8N9U0 490 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 CCDC26Q8TAB7 109 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 NKD2Q969F2 451 aaPredicted RBP14.32□□□□□ -0.12
TPM1-230ENST00000561266 PSMB7Q99436 277 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 CNPY3Q9BT09 278 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 EPC1Q9H2F5 836 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 PARVAQ9NVD7 372 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 SLCO3A1Q9UIG8 710 aa14.32□□□□□ -0.12
TPM1-230ENST00000561266 TNRC6BQ9UPQ9 1833 aaKnown RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 CCDC163A0A0D9SF12 145 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 TIMM44O43615 452 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 NDUFV2P19404 249 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 STK19P49842 368 aaPredicted RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 PLK1P53350 603 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 COPAP53621 1224 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 TRIM14Q14142 442 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 EIF4HQ15056 248 aaKnown RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 CA9Q16790 459 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 RABGAP1LQ5R372 815 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 CCDC122Q5T0U0 273 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 SCYL2Q6P3W7 929 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 ZC3H14Q6PJT7 736 aaKnown RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 TRMT11Q7Z4G4 463 aaKnown RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 TFAP2DQ7Z6R9 452 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 KBTBD6Q86V97 674 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 GAB3Q8WWW8 586 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 RPL10LQ96L21 214 aaKnown RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 FEM1AQ9BSK4 669 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 MKRN2Q9H000 416 aaKnown RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 OSBPL2Q9H1P3 480 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 KIAA1522Q9P206 1035 aaPredicted RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 OR12D3Q9UGF7 316 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 MBD1Q9UIS9 605 aaPredicted RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 FZD10Q9ULW2 581 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 ERVW-1Q9UQF0 538 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 TBC1D30Q9Y2I9 924 aa14.31□□□□□ -0.12
TPM1-230ENST00000561266 PTPRZ1P23471 2315 aaPredicted RBP14.31□□□□□ -0.12
TPM1-230ENST00000561266 A0A0D9SEW6 157 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 TYW5A2RUC4 315 aaKnown RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 GFRA3O60609 400 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms