RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 HMGB4Q8WW32 186 aa9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 IGSF8Q969P0 613 aa9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 C1orf74Q96LT6 269 aa9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 CCDC42Q96M95 316 aa9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 PRICKLE1Q96MT3 831 aaPredicted RBP9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 HAPLN3Q96S86 360 aa9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 PRMT1Q99873 361 aaKnown RBP9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 CNPY3Q9BT09 278 aa9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 SYT11Q9BT88 431 aa9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 TPSD1Q9BZJ3 242 aa9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 MRPL47Q9HD33 250 aaKnown RBP9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 OR12D3Q9UGF7 316 aa9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 RAD54BQ9Y620 910 aa9.31□□□□□ -0.92
SNRPA1-214ENST00000560987 MYO18AQ92614 2054 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 A0A087X0T9 212 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 A0A1B0GVM2 712 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 TCAF2A6NFQ2 919 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 E9PAM4 449 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 GFRA2O00451 464 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 AP5Z1O43299 807 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 CCP110O43303 1012 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 ADAM23O75077 832 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 CLDN11O75508 207 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 RPP40O75818 363 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 PAPSS2O95340 614 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 EPHX1P07099 455 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 FAM228BP0C875 321 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 HNRNPLP14866 589 aaKnown RBP eCLIP9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 OR1E1P30953 314 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 HOXA6P31267 233 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 CNR2P34972 360 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 SSR1P43307 286 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 CDH4P55283 916 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 ZNF234Q14588 700 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 EIF4HQ15056 248 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 ACCSLQ4AC99 568 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 RAB6CQ53S08 254 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 OTUD1Q5VV17 481 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 TMEM215Q68D42 235 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 SARM1Q6SZW1 724 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 GAS2L3Q86XJ1 694 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 CNGA4Q8IV77 575 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 APCDD1Q8J025 514 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 GPR161Q8N6U8 529 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 ZBTB44Q8NCP5 570 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 RUBCNQ92622 972 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 ADAM33Q9BZ11 813 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 RAB6CQ9H0N0 254 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 MUC3BQ9H195 1237 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 ISCUQ9H1K1 167 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 ANLNQ9NQW6 1124 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 MPP6Q9NZW5 540 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 ARHGAP20Q9P2F6 1191 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 THAP10Q9P2Z0 257 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 SUN2Q9UH99 717 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 PCSK1NQ9UHG2 260 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 SCINQ9Y6U3 715 aa9.3□□□□□ -0.92
SNRPA1-214ENST00000560987 TMEM191CA6NGB0 347 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 CREB3O43889 395 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 CNTN5O94779 1100 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 ASLP04424 464 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 RHOCP08134 193 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 DLDP09622 509 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 ACADMP11310 421 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 HLA-EP13747 358 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 MZF1P28698 734 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 CSKP41240 450 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 IL12RB1P42701 662 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 ZNF75DP51815 510 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 GALCP54803 685 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 HDAC4P56524 1084 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 GSCP56915 257 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 ECT2LQ008S8 904 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 GFPT1Q06210 699 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 SLC12A1Q13621 1099 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 BYSLQ13895 437 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 PITRM1Q5JRX3 1037 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 EFHC2Q5JST6 749 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 PLEKHA7Q6IQ23 1121 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 KIAA1211LQ6NV74 962 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 KIAA1324Q6UXG2 1013 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 ERMP1Q7Z2K6 904 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 TFAP2DQ7Z6R9 452 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 ADIPOR2Q86V24 386 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 ZNF354CQ86Y25 554 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 CCDC185Q8N715 623 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 ZNF366Q8N895 744 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 CENPIQ92674 756 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 RPL10LQ96L21 214 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 DNAJC7Q99615 494 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 CHP1Q99653 195 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 MAGEB5Q9BZ81 275 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 ZYG11BQ9C0D3 744 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 THAP2Q9H0W7 228 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 OSBPL2Q9H1P3 480 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 NHEJ1Q9H9Q4 299 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 NCDNQ9UBB6 729 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 EBF1Q9UH73 591 aa9.29□□□□□ -0.92
SNRPA1-214ENST00000560987 HCN2Q9UL51 889 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms