RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 LINC00597Q9H2U6 94 aa7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 EBF3Q9H4W6 596 aa7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 DHX35Q9H5Z1 703 aaKnown RBP7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 PCDH18Q9HCL0 1135 aa7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 CD320Q9NPF0 282 aa7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 SPHK2Q9NRA0 654 aa7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 DUS2Q9NX74 493 aaKnown RBP7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 MARK1Q9P0L2 795 aa7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 TBC1D14Q9P2M4 693 aa7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 ZNF212Q9UDV6 495 aa7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 VANGL2Q9ULK5 521 aa7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 DUSP12Q9UNI6 340 aa7.26□□□□□ -1.25
CTDSPL2-210ENST00000560834 MYOFQ9NZM1 2061 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 CCDC66A2RUB6 948 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 MIF4GDA9UHW6 222 aaKnown RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 SLC9A3R1O14745 358 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 CACNG3O60359 315 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 TSPAN3O60637 253 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 CNTN5O94779 1100 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 NFATC1O95644 943 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 FBXO45P0C2W1 286 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 ADH5P11766 374 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 SRFP11831 508 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 GOT1P17174 413 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 CHKAP35790 457 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 PEX5P50542 639 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 MLLT6P55198 1093 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 RPS24P62847 133 aaKnown RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 RUNX3Q13761 415 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 DPYSQ14117 519 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 DHCR24Q15392 516 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 TAZQ16635 292 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 BOLA3Q53S33 107 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 ALFQ53S48 1182 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 TJAP1Q5JTD0 557 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 LY6G5CQ5SRR4 150 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 ACBD5Q5T8D3 534 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 TTC39BQ5VTQ0 682 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 NAIF1Q69YI7 327 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 RHBDF2Q6PJF5 856 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 NYAP1Q6ZVC0 841 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 PEX26Q7Z412 305 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 NLRP14Q86W24 1093 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 C12orf40Q86WS4 652 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 TMEM25Q86YD3 366 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 ETFBKMTQ8IXQ9 262 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 YAF2Q8IY57 180 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 CFAP52Q8N1V2 620 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 HJURPQ8NCD3 748 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 RAPGEF5Q92565 580 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 DNASE1L2Q92874 299 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 IRF7Q92985 503 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 TBC1D31Q96DN5 1066 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 RPRD1AQ96P16 312 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 NECAB3Q96P71 396 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 CSPG4P5Q96PW8 444 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 DDX50Q9BQ39 737 aaKnown RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 ZNF670Q9BS34 389 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 HERPUD2Q9BSE4 406 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 TLR10Q9BXR5 811 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 SIK2Q9H0K1 926 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 ECT2Q9H8V3 914 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 TRPV5Q9NQA5 729 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 SLC2A4RGQ9NR83 387 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 THG1LQ9NWX6 298 aaKnown RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 DDX56Q9NY93 547 aaKnown RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 GTSE1Q9NYZ3 720 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 MAP10Q9P2G4 905 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 PPARGC1AQ9UBK2 798 aaKnown RBP7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 OR12D3Q9UGF7 316 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 SLC12A6Q9UHW9 1150 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 AMFRQ9UKV5 643 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 PCDHA3Q9Y5H8 950 aa7.25□□□□□ -1.25
CTDSPL2-210ENST00000560834 hCG_1818297A0A087WSY0 165 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 A0A1B0GVM2 712 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 LRRD1A4D1F6 860 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 TCAF2A6NFQ2 919 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 SHISA7A6NL88 538 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 DRGXA6NNA5 263 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 WASH4PA8MWX3 477 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 ZNF487B1APH4 448 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 NEDD8-MDP1E9PL57 170 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 PI4K2BG5E9Z4 385 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 H3BRJ5 948 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 EEF2KO00418 725 aaKnown RBP7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 DCLK1O15075 740 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 CREB3O43889 395 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 KIF5CO60282 957 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 TBL1XO60907 577 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 LUC7L3O95232 432 aaKnown RBP7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 ADH1CP00326 375 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 ATP1A1P05023 1023 aaKnown RBP7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 TNNT1P13805 278 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 TYRP14679 529 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 KDELR1P24390 212 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 IL4RP24394 825 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 HTR7P34969 479 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 OPRD1P41143 372 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 CDKN2BP42772 138 aa7.24□□□□□ -1.25
CTDSPL2-210ENST00000560834 SOX9P48436 509 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms