RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ZNF683Q8IZ20 524 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 PIGKQ92643 395 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 RPRD1AQ96P16 312 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 SYT11Q9BT88 431 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 WDCPQ9H6R7 721 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 PRSS16Q9NQE7 514 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 VPS45Q9NRW7 570 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 TMEM74BQ9NUR3 256 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 SEPT11Q9NVA2 429 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 RRN3Q9NYV6 651 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 KIAA1522Q9P206 1035 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 ATXN2Q99700 1313 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 A0A1B0GVM2 712 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 TCAF2A6NFQ2 919 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 LRRC53A6NM62 1247 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 TTC34A8MYJ7 566 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 PRR5-ARHGAP8B1AHC4 643 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 ZNF217O75362 1048 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 F9P00740 461 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 FERP16591 822 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 RFC1P35251 1148 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 NSFP46459 744 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 STK19P49842 368 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 TPMTP51580 245 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 ARHGAP8P85298 464 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 NR1I3Q14994 352 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 C15orf59Q2T9L4 293 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 PLEKHG6Q3KR16 790 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 CCDC14Q49A88 953 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 FILIP1LQ4L180 1135 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 ALFQ53S48 1182 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 BRMS1LQ5PSV4 323 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 RABGAP1LQ5R372 815 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 MON1BQ7L1V2 547 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 ARCQ7LC44 396 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 FAM131BQ86XD5 332 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 DNAAF5Q86Y56 855 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 PHF13Q86YI8 300 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 SLC41A1Q8IVJ1 513 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 CCDC117Q8IWD4 279 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 ZNF557Q8N988 423 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 C12orf50Q8NA57 414 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 OR2T3Q8NH03 318 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 RXFP2Q8WXD0 754 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 ALG14Q96F25 216 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 SIPA1Q96FS4 1042 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 TOE1Q96GM8 510 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 RPL10LQ96L21 214 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 ITM2CQ9NQX7 267 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 TAS2R14Q9NYV8 317 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 ADAM22Q9P0K1 906 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 USP36Q9P275 1121 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 SLCO3A1Q9UIG8 710 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 CDV3Q9UKY7 258 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 ERVW-1Q9UQF0 538 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 DOCK4Q8N1I0 1966 aa12.01□□□□□ -0.49
RABGGTA-216ENST00000560243 A0A1W2PQC6 194 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 LNP1A1A4G5 178 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 DCDC2BA2VCK2 349 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 C2CD4BA6NLJ0 364 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 SIN3BO75182 1162 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 ENDOD1O94919 500 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 SERPINC1P01008 464 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 ASLP04424 464 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 VAV1P15498 845 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 RDXP35241 583 aaKnown RBP12□□□□□ -0.49
RABGGTA-216ENST00000560243 RPS14P62263 151 aaKnown RBP12□□□□□ -0.49
RABGGTA-216ENST00000560243 IRX4P78413 519 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 FANCCQ00597 558 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 ECT2LQ008S8 904 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 PUM1Q14671 1186 aaKnown RBP eCLIP12□□□□□ -0.49
RABGGTA-216ENST00000560243 E2F5Q15329 346 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 CDO1Q16878 200 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 C5orf22Q49AR2 442 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 AASDHQ4L235 1098 aaPredicted RBP12□□□□□ -0.49
RABGGTA-216ENST00000560243 TTC39BQ5VTQ0 682 aaPredicted RBP12□□□□□ -0.49
RABGGTA-216ENST00000560243 LYSMD4Q5XG99 296 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 SLC36A4Q6YBV0 504 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 SND1Q7KZF4 910 aaKnown RBP eCLIP12□□□□□ -0.49
RABGGTA-216ENST00000560243 METTL3Q86U44 580 aaKnown RBP12□□□□□ -0.49
RABGGTA-216ENST00000560243 FAM124AQ86V42 546 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 PRCCQ92733 491 aaPredicted RBP12□□□□□ -0.49
RABGGTA-216ENST00000560243 HSPA12BQ96MM6 686 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 MAGEB5Q9BZ81 275 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 TTYH3Q9C0H2 523 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 FSCN3Q9NQT6 498 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 MPP6Q9NZW5 540 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 PILRBQ9UKJ0 227 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 OR51B4Q9Y5P0 310 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 KNL1Q8NG31 2342 aa12□□□□□ -0.49
RABGGTA-216ENST00000560243 NYNRINQ9P2P1 1898 aaKnown RBP12□□□□□ -0.49
RABGGTA-216ENST00000560243 ADAMTS9Q9P2N4 1935 aa11.99□□□□□ -0.49
RABGGTA-216ENST00000560243 CACNA1EQ15878 2313 aa11.99□□□□□ -0.49
RABGGTA-216ENST00000560243 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-216ENST00000560243 TCRBV5S1A1TA0A578 114 aa11.99□□□□□ -0.49
RABGGTA-216ENST00000560243 AP5Z1O43299 807 aa11.99□□□□□ -0.49
RABGGTA-216ENST00000560243 KRT3P12035 628 aa11.99□□□□□ -0.49
RABGGTA-216ENST00000560243 CD6P30203 668 aa11.99□□□□□ -0.49
RABGGTA-216ENST00000560243 SDC4P31431 198 aa11.99□□□□□ -0.49
RABGGTA-216ENST00000560243 PLK1P53350 603 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms