RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 C2orf49Q9BVC5 232 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-215ENST00000560207 DHX35Q9H5Z1 703 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-215ENST00000560207 OSGEPQ9NPF4 335 aa12.41□□□□□ -0.42
RABGGTA-215ENST00000560207 TMEM248Q9NWD8 314 aa12.41□□□□□ -0.42
RABGGTA-215ENST00000560207 PLK2Q9NYY3 685 aa12.41□□□□□ -0.42
RABGGTA-215ENST00000560207 XPO7Q9UIA9 1087 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-215ENST00000560207 GGA2Q9UJY4 613 aa12.41□□□□□ -0.42
RABGGTA-215ENST00000560207 SLC8A2Q9UPR5 921 aa12.41□□□□□ -0.42
RABGGTA-215ENST00000560207 ADGRG1Q9Y653 693 aa12.41□□□□□ -0.42
RABGGTA-215ENST00000560207 VCANP13611 3396 aa12.41□□□□□ -0.42
RABGGTA-215ENST00000560207 ZSCAN5CA6NGD5 496 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 SHISA7A6NL88 538 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 EEF2KO00418 725 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 DAPK3O43293 454 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 ZSCAN12O43309 604 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 PSTPIP1O43586 416 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 SPOPO43791 374 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 LRIG2O94898 1065 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 PAPSS2O95340 614 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 SRPRAP08240 638 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 EPHB2P29323 1055 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 HLA-FP30511 346 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 AVPR2P30518 371 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 OR1E1P30953 314 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 CETN2P41208 172 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 SSR1P43307 286 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 SLC6A11P48066 632 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 TPI1P60174 286 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 SLC20A2Q08357 652 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 CWF19L1Q69YN2 538 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 DNAAF5Q86Y56 855 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 LRRC49Q8IUZ0 686 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 ZNF683Q8IZ20 524 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 CFAP52Q8N1V2 620 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 FAM71BQ8TC56 605 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 KIAA1524Q8TCG1 905 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 TTC17Q96AE7 1141 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 SNRNP25Q9BV90 132 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 FAM126AQ9BYI3 521 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 TRIM7Q9C029 511 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 MAGEH1Q9H213 219 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 FBRSQ9HAH7 460 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 ELOVL2Q9NXB9 296 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 PCSK1NQ9UHG2 260 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 HPCAL4Q9UM19 191 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 ATG2BQ96BY7 2078 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 NUP205Q92621 2012 aa12.4□□□□□ -0.42
RABGGTA-215ENST00000560207 ZDBF2Q9HCK1 2354 aa12.4□□□□□ -0.43
RABGGTA-215ENST00000560207 CCDC66A2RUB6 948 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 K7EQS6 105 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 RHOCP08134 193 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 DLDP09622 509 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 RARAP10276 462 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 CD72P21854 359 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 MSNP26038 577 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 NTSR1P30989 418 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 SERPINB6P35237 376 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 NDST2P52849 883 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 NRLP54845 237 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 ST8SIA6P61647 398 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 SLC25A11Q02978 314 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 KDSRQ06136 332 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 FZD5Q13467 585 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 KRT81Q14533 505 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 PLEKHG6Q3KR16 790 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 PARP15Q460N3 678 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 TMCO4Q5TGY1 634 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 RNF219Q5W0B1 726 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 RETSATQ6NUM9 610 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 RWDD4Q6NW29 188 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 SYT13Q7L8C5 426 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 DAAM2Q86T65 1068 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 C12orf40Q86WS4 652 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 UMODL1-AS1Q8N2C9 162 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 CAMKK1Q8N5S9 505 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 ARFGAP1Q8N6T3 406 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 ZNF513Q8N8E2 541 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 RTL3Q8N8U3 475 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 KCTD6Q8NC69 237 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 CASKIN2Q8WXE0 1202 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 BHMTQ93088 406 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 IGSF8Q969P0 613 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 ZNF670Q9BS34 389 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 FOXQ1Q9C009 403 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 ANLNQ9NQW6 1124 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 ABCB8Q9NUT2 735 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 DLGAP2Q9P1A6 1054 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 SUN2Q9UH99 717 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 FBXO4Q9UKT5 387 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 ALG6Q9Y672 507 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 TRIOO75962 3097 aa12.39□□□□□ -0.43
RABGGTA-215ENST00000560207 CCDC163A0A0D9SF12 145 aa12.38□□□□□ -0.43
RABGGTA-215ENST00000560207 GOLGA6L9A6NEM1 432 aa12.38□□□□□ -0.43
RABGGTA-215ENST00000560207 MIF4GDA9UHW6 222 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-215ENST00000560207 I6L893 689 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-215ENST00000560207 CREB3O43889 395 aa12.38□□□□□ -0.43
RABGGTA-215ENST00000560207 RNF40O75150 1001 aa12.38□□□□□ -0.43
RABGGTA-215ENST00000560207 EGFP01133 1207 aa12.38□□□□□ -0.43
RABGGTA-215ENST00000560207 HOXA6P31267 233 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms