RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CARNMT1Q8N4J0 409 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 RTL3Q8N8U3 475 aaKnown RBP10.73□□□□□ -0.69
TPM1-221ENST00000559831 PRELID2Q8N945 189 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 TTC13Q8NBP0 860 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 SPATA4Q8NEY3 305 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 MAFAQ8NHW3 353 aaPredicted RBP10.73□□□□□ -0.69
TPM1-221ENST00000559831 ACTL9Q8TC94 416 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 OSCP1Q8WVF1 389 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 P3H4Q92791 437 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 E2F7Q96AV8 911 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 ZFYVE19Q96K21 471 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 PLA2G2FQ9BZM2 168 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 PRDM16Q9HAZ2 1276 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 TRPV4Q9HBA0 871 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 RBM12Q9NTZ6 932 aaKnown RBP10.73□□□□□ -0.69
TPM1-221ENST00000559831 TMEM248Q9NWD8 314 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 THG1LQ9NWX6 298 aaKnown RBP10.73□□□□□ -0.69
TPM1-221ENST00000559831 OBP2AQ9NY56 170 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 PLK2Q9NYY3 685 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 TICRRQ7Z2Z1 1910 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 CHD5Q8TDI0 1954 aa10.73□□□□□ -0.69
TPM1-221ENST00000559831 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 A0A1B0GVM2 712 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 TCAF2A6NFQ2 919 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 WASH4PA8MWX3 477 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 C2CD4DB7Z1M9 353 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 NEDD8-MDP1E9PL57 170 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 H0Y626 953 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 H7C0C1 242 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 DFFAO00273 331 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 RIOK3O14730 519 aaKnown RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 MCF2LO15068 1137 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 PHF2O75151 1096 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 CLDN11O75508 207 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 ARSAP15289 507 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 OR1E1P30953 314 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 ATP5OP48047 213 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 EIF3EP60228 445 aaKnown RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 SLC10A2Q12908 348 aaPredicted RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 ZNF177Q13360 481 aaPredicted RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 NOMO1Q15155 1222 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 ANO4Q32M45 955 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 LEXMQ3ZCV2 418 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 PTCRAQ6ISU1 281 aaPredicted RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 MTSS1LQ765P7 747 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 B4GALNT4Q76KP1 1039 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 CHST9Q7L1S5 443 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 ZNF572Q7Z3I7 529 aaPredicted RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 ZC3H18Q86VM9 953 aaKnown RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 ZNF354CQ86Y25 554 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 TMEM25Q86YD3 366 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 CCDC117Q8IWD4 279 aaPredicted RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 TP53INP2Q8IXH6 220 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 NPWQ8N729 165 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 LRRN4CLQ8ND94 238 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 LRRN4Q8WUT4 740 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 FGF14Q92915 247 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 MAGOHBQ96A72 148 aaKnown RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 ELSPBP1Q96BH3 223 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 OTUB2Q96DC9 234 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 ASIC4Q96FT7 647 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 RPGRIP1Q96KN7 1286 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 KRT12Q99456 494 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 BBS2Q9BXC9 721 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 DDX47Q9H0S4 455 aaKnown RBP10.72□□□□□ -0.69
TPM1-221ENST00000559831 SPHK2Q9NRA0 654 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 NDFIP2Q9NV92 336 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 EPS15L1Q9UBC2 864 aa10.72□□□□□ -0.69
TPM1-221ENST00000559831 CCDC188H7C350 402 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 GFRA2O00451 464 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 LIASO43766 372 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 LUC7L3O95232 432 aaKnown RBP10.71□□□□□ -0.69
TPM1-221ENST00000559831 SLU7O95391 586 aaKnown RBP10.71□□□□□ -0.69
TPM1-221ENST00000559831 NFATC1O95644 943 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 CYP17A1P05093 508 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 RHOCP08134 193 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 PSMC3P17980 439 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 HOXD9P28356 352 aaPredicted RBP10.71□□□□□ -0.69
TPM1-221ENST00000559831 KCNJ1P48048 391 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 NR2C2P49116 596 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 MAPKAPK2P49137 400 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 NUMBP49757 651 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 TFF2Q03403 129 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 CDH18Q13634 790 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 HTR4Q13639 388 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 CCNG2Q16589 344 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 EML3Q32P44 896 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 LY6G5CQ5SRR4 150 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 C6orf118Q5T5N4 469 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 DARS2Q6PI48 645 aaKnown RBP10.71□□□□□ -0.69
TPM1-221ENST00000559831 BZW1Q7L1Q6 419 aaKnown RBP10.71□□□□□ -0.69
TPM1-221ENST00000559831 MFN1Q8IWA4 741 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 MFSD6LQ8IWD5 586 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 LZTR1Q8N653 840 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 IRF7Q92985 503 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 CCDC114Q96M63 670 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 RPP25Q9BUL9 199 aaKnown RBP10.71□□□□□ -0.69
TPM1-221ENST00000559831 PHF7Q9BWX1 381 aaPredicted RBP10.71□□□□□ -0.69
TPM1-221ENST00000559831 SLC39A8Q9C0K1 460 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 EBF3Q9H4W6 596 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms