RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 GPATCH2LQ9NWQ4 482 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 LSM7Q9UK45 103 aaKnown RBP17.06■□□□□ 0.32
TPM1-219ENST00000559397 SCAMP3O14828 347 aaKnown RBP17.05■□□□□ 0.32
TPM1-219ENST00000559397 ACSL4O60488 711 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 ECI2O75521 394 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 LATS1O95835 1130 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 MOCS2O96007 188 aaPredicted RBP17.05■□□□□ 0.32
TPM1-219ENST00000559397 FAM153BP0C7A2 387 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 L1CAMP32004 1257 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 RPL21P46778 160 aaKnown RBP17.05■□□□□ 0.32
TPM1-219ENST00000559397 VCPP55072 806 aaKnown RBP17.05■□□□□ 0.32
TPM1-219ENST00000559397 LMNB2Q03252 620 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 MTA1Q13330 715 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 HTR4Q13639 388 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 BYSLQ13895 437 aaKnown RBP17.05■□□□□ 0.32
TPM1-219ENST00000559397 TFDP2Q14188 446 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 KRT81Q14533 505 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 KCTD19Q17RG1 926 aaPredicted RBP17.05■□□□□ 0.32
TPM1-219ENST00000559397 FAM153CQ494X1 144 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 FAM133BQ5BKY9 247 aaKnown RBP17.05■□□□□ 0.32
TPM1-219ENST00000559397 BBS7Q8IWZ6 715 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 FAM217AQ8IXS0 508 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 TTC16Q8NEE8 873 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 FAM118BQ9BPY3 351 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 ZNF670Q9BS34 389 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 RPP25Q9BUL9 199 aaKnown RBP17.05■□□□□ 0.32
TPM1-219ENST00000559397 NEUROG2Q9H2A3 272 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 ZDHHC18Q9NUE0 388 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 GRHL1Q9NZI5 618 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 FAM153AQ9UHL3 310 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 SLC12A6Q9UHW9 1150 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 DNPEPQ9ULA0 475 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 ZNF510Q9Y2H8 683 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 HS3ST4Q9Y661 456 aa17.05■□□□□ 0.32
TPM1-219ENST00000559397 APOC4-APOC2K7ER74 178 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 GAS8O95995 478 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 APOC2P02655 101 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 SLC11A2P49281 568 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 HLTFQ14527 1009 aaKnown RBP eCLIP17.04■□□□□ 0.32
TPM1-219ENST00000559397 AAK1Q2M2I8 961 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 MS4A13Q5J8X5 152 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 ARTNQ5T4W7 220 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 PIK3R6Q5UE93 754 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 NADSYN1Q6IA69 706 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 ZDHHC24Q6UX98 284 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 RFX6Q8HWS3 928 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 MFSD6LQ8IWD5 586 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 MREGQ8N565 214 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 ACTL9Q8TC94 416 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 PRMT1Q99873 361 aaKnown RBP17.04■□□□□ 0.32
TPM1-219ENST00000559397 KXD1Q9BQD3 176 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 FAM129AQ9BZQ8 928 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 TRIM31Q9BZY9 425 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 OSBPL2Q9H1P3 480 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 AP4E1Q9UPM8 1137 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 SNX24Q9Y343 169 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 SNX10Q9Y5X0 201 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 NUMBLQ9Y6R0 609 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 LOC730098B7Z3J9 87 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 ITGAVP06756 1048 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 IVDP26440 423 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 TNNT3P45378 269 aaPredicted RBP17.04■□□□□ 0.32
TPM1-219ENST00000559397 MLLT6P55198 1093 aaPredicted RBP17.04■□□□□ 0.32
TPM1-219ENST00000559397 FCHO2Q0JRZ9 810 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 PPP1R7Q15435 360 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 SLC9A4Q6AI14 798 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 PQLC3Q8N755 202 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 C1orf74Q96LT6 269 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 GDAP1L1Q96MZ0 367 aa17.04■□□□□ 0.32
TPM1-219ENST00000559397 GOLGA6L7A0A1B0GV03 622 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 GFRA2O00451 464 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 SLC6A4P31645 630 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 DYNLT1P63172 113 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 OTUD4Q01804 1114 aaKnown RBP17.03■□□□□ 0.32
TPM1-219ENST00000559397 ANKRD20A8PQ5CZ79 823 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 EFHC2Q5JST6 749 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 ADGRF1Q5T601 910 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 C14orf80Q86SX3 495 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 PYROXD2Q8N2H3 581 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 ALLCQ8N6M5 410 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 PCDH19Q8TAB3 1148 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 DEPDC1BQ8WUY9 529 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 OSCP1Q8WVF1 389 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 ATXN2LQ8WWM7 1075 aaKnown RBP17.03■□□□□ 0.32
TPM1-219ENST00000559397 ASIC4Q96FT7 647 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 CCDC114Q96M63 670 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 KCTD15Q96SI1 283 aaPredicted RBP17.03■□□□□ 0.32
TPM1-219ENST00000559397 MAK16Q9BXY0 300 aaKnown RBP17.03■□□□□ 0.32
TPM1-219ENST00000559397 LINC00597Q9H2U6 94 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 DHX35Q9H5Z1 703 aaKnown RBP17.03■□□□□ 0.32
TPM1-219ENST00000559397 WHRNQ9P202 907 aa17.03■□□□□ 0.32
TPM1-219ENST00000559397 RCOR3Q9P2K3 495 aaPredicted RBP17.03■□□□□ 0.32
TPM1-219ENST00000559397 FAM72CH0Y354 149 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 PSMC3P17980 439 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 GGCXP38435 758 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 NRG1Q02297 640 aaPredicted RBP17.02■□□□□ 0.32
TPM1-219ENST00000559397 SEMA3BQ13214 749 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 AUHQ13825 339 aaKnown RBP17.02■□□□□ 0.32
TPM1-219ENST00000559397 FAM72AQ5TYM5 149 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms