RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 PLEKHG6Q3KR16 790 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 LYSMD4Q5XG99 296 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 CXorf57Q6NSI4 855 aaKnown RBP11.3□□□□□ -0.6
SPG11-216ENST00000559347 FBXL22Q6P050 247 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 SLC36A4Q6YBV0 504 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 ARCQ7LC44 396 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 CCDC117Q8IWD4 279 aaPredicted RBP11.3□□□□□ -0.6
SPG11-216ENST00000559347 EMC1Q8N766 993 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 OR2T3Q8NH03 318 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 SLC30A5Q8TAD4 765 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 BAP1Q92560 729 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 IGSF8Q969P0 613 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 MRGPRX3Q96LB0 322 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 CFAP57Q96MR6 1250 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 RPRD1AQ96P16 312 aaPredicted RBP11.3□□□□□ -0.6
SPG11-216ENST00000559347 PCDHB18PQ96TA0 734 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 TKTL2Q9H0I9 626 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 VANGL2Q9ULK5 521 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 PLA2G4CQ9UP65 541 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 PAXBP1Q9Y5B6 917 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 ITIH6Q6UXX5 1313 aa11.3□□□□□ -0.6
SPG11-216ENST00000559347 LNP1A1A4G5 178 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 PATE3B3GLJ2 98 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 SLC30A4O14863 429 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 MOCS3O95396 460 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 F9P00740 461 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 IGLV3-19P01714 112 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 PDGFRAP16234 1089 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 PTMSP20962 102 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 ITPKAP23677 461 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 CTSOP43234 321 aaPredicted RBP11.29□□□□□ -0.6
SPG11-216ENST00000559347 NSFP46459 744 aaKnown RBP11.29□□□□□ -0.6
SPG11-216ENST00000559347 VASPP50552 380 aaPredicted RBP11.29□□□□□ -0.6
SPG11-216ENST00000559347 TPMTP51580 245 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 LIMK1P53667 647 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 SLC12A1Q13621 1099 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 C5orf22Q49AR2 442 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 SND1Q7KZF4 910 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPG11-216ENST00000559347 MON1BQ7L1V2 547 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 ERMP1Q7Z2K6 904 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 C14orf80Q86SX3 495 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 TMPRSS6Q8IU80 811 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 SYT12Q8IV01 421 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 SLC41A1Q8IVJ1 513 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 ZNF683Q8IZ20 524 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 APCDD1Q8J025 514 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 KDM1BQ8NB78 822 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 JOSD2Q8TAC2 188 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 PIGKQ92643 395 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 PRCCQ92733 491 aaPredicted RBP11.29□□□□□ -0.6
SPG11-216ENST00000559347 SIPA1Q96FS4 1042 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 RTKNQ9BST9 563 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 EDEM2Q9BV94 578 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 WDCPQ9H6R7 721 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 FBRSQ9HAH7 460 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 PRSS16Q9NQE7 514 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 TMPRSS4Q9NRS4 437 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 WSB2Q9NYS7 404 aaPredicted RBP11.29□□□□□ -0.6
SPG11-216ENST00000559347 KIAA1522Q9P206 1035 aaPredicted RBP11.29□□□□□ -0.6
SPG11-216ENST00000559347 MYO6Q9UM54 1294 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 ERVW-1Q9UQF0 538 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 TMEM131Q92545 1883 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 CACNA1EQ15878 2313 aa11.29□□□□□ -0.6
SPG11-216ENST00000559347 A0A1W2PQC6 194 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 LRRC53A6NM62 1247 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 GJB6O95452 261 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 CALB1P05937 261 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 SRPRAP08240 638 aaKnown RBP11.28□□□□□ -0.6
SPG11-216ENST00000559347 ACADMP11310 421 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 FERP16591 822 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 MZF1P28698 734 aaPredicted RBP11.28□□□□□ -0.6
SPG11-216ENST00000559347 CD6P30203 668 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 RDXP35241 583 aaKnown RBP11.28□□□□□ -0.6
SPG11-216ENST00000559347 HOXD12P35452 270 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 DPP6P42658 865 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 PTPN9P43378 593 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 NUMBP49757 651 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 ST8SIA6P61647 398 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 ZNF33AQ06730 810 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 ARID5BQ14865 1188 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 HNRNPA1L2Q32P51 320 aaKnown RBP11.28□□□□□ -0.6
SPG11-216ENST00000559347 FILIP1LQ4L180 1135 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 RAB6CQ53S08 254 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 E4F1Q66K89 784 aaPredicted RBP11.28□□□□□ -0.6
SPG11-216ENST00000559347 DGLUCYQ7Z3D6 616 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 LUZP1Q86V48 1076 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 FAM131BQ86XD5 332 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 PHF13Q86YI8 300 aaPredicted RBP11.28□□□□□ -0.6
SPG11-216ENST00000559347 DEFB119Q8N690 84 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 C3orf20Q8ND61 904 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 OR52K2Q8NGK3 314 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 HSPA12BQ96MM6 686 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 NAP1L5Q96NT1 182 aaPredicted RBP11.28□□□□□ -0.6
SPG11-216ENST00000559347 AGPAT1Q99943 283 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 SYT11Q9BT88 431 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 TTYH3Q9C0H2 523 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 SIK2Q9H0K1 926 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 RAB6CQ9H0N0 254 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 MTG2Q9H4K7 406 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 CBX8Q9HC52 389 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms