RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PRMT1Q99873 361 aaKnown RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 NUSAP1Q9BXS6 441 aaKnown RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 TKTL2Q9H0I9 626 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 HSD3B7Q9H2F3 369 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 TMEM9BQ9NQ34 198 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 SEPT11Q9NVA2 429 aaKnown RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 ASNSD1Q9NWL6 643 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 WSB2Q9NYS7 404 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 KIAA1522Q9P206 1035 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 TPRP12270 2363 aaKnown RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 CACNA1EQ15878 2313 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 LGALS16A8MUM7 142 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 I6L893 689 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-208ENST00000558827 TM4SF5O14894 197 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 TEX33O43247 280 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 FOXD2O60548 495 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-208ENST00000558827 CNTN5O94779 1100 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 VAV1P15498 845 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 ACSL1P33121 698 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 CDH5P33151 784 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-208ENST00000558827 MATKP42679 507 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 SNX16P57768 344 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 ST8SIA6P61647 398 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 NOMO3P69849 1222 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 FOXK2Q01167 660 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 FMO1Q01740 532 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 DEUP1Q05D60 604 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 DCAF12L1Q5VU92 463 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 ANKRD20A12PQ8NF67 263 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 MYO19Q96H55 970 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 ZNF419Q96HQ0 510 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-208ENST00000558827 CFAP57Q96MR6 1250 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 NPY6RQ99463 290 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 C11orf70Q9BRQ4 267 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 METTL5Q9NRN9 209 aaKnown RBP12.92□□□□□ -0.34
SMAD3-208ENST00000558827 USP36Q9P275 1121 aaKnown RBP12.92□□□□□ -0.34
SMAD3-208ENST00000558827 NOCTQ9UK39 431 aaKnown RBP12.92□□□□□ -0.34
SMAD3-208ENST00000558827 SLCO1B1Q9Y6L6 691 aa12.92□□□□□ -0.34
SMAD3-208ENST00000558827 FAM47DPA6NHR8 397 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 BNIP3LO60238 219 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 MOCS3O95396 460 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 SLC2A3P11169 496 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 STAT1P42224 750 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 GABRB2P47870 512 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 LIMK1P53667 647 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 JAM2P57087 298 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 ATP11AP98196 1134 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 CDO1Q16878 200 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 DUOXA1Q1HG43 343 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 PLEKHG6Q3KR16 790 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 ALFQ53S48 1182 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 RABGAP1LQ5R372 815 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 N4BP2L1Q5TBK1 243 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-208ENST00000558827 RNF219Q5W0B1 726 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-208ENST00000558827 PSAPL1Q6NUJ1 521 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 APTXQ7Z2E3 356 aaKnown RBP12.91□□□□□ -0.34
SMAD3-208ENST00000558827 MMAAQ8IVH4 418 aaKnown RBP12.91□□□□□ -0.34
SMAD3-208ENST00000558827 STK40Q8N2I9 435 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 ZCCHC9Q8N567 271 aaKnown RBP12.91□□□□□ -0.34
SMAD3-208ENST00000558827 ZNF397Q8NF99 534 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-208ENST00000558827 MAGEB5Q9BZ81 275 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 C6orf106Q9H6K1 298 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-208ENST00000558827 WDCPQ9H6R7 721 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 SUN2Q9UH99 717 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 EIF2B4Q9UI10 523 aaKnown RBP12.91□□□□□ -0.34
SMAD3-208ENST00000558827 SLC6A14Q9UN76 642 aa12.91□□□□□ -0.34
SMAD3-208ENST00000558827 MUC22E2RYF6 1773 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-208ENST00000558827 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-208ENST00000558827 PLK4O00444 970 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 MID1O15344 667 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 SRGAP2O75044 1071 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 FSBPO95073 299 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 KCNK5O95279 499 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 DNTTP04053 509 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 PSMD8P48556 350 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 CXCR3P49682 368 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 NOVA1P51513 510 aaKnown RBP12.9□□□□□ -0.34
SMAD3-208ENST00000558827 ATXN3P54252 364 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-208ENST00000558827 ECT2LQ008S8 904 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 CDR2Q01850 454 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 GFPT1Q06210 699 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-208ENST00000558827 ZNF177Q13360 481 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-208ENST00000558827 E2F5Q15329 346 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 C15orf59Q2T9L4 293 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-208ENST00000558827 POM121L1PQ3SYA9 428 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 ACCSLQ4AC99 568 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 SPDYCQ5MJ68 293 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 SYCP2LQ5T4T6 812 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 C9orf64Q5T6V5 341 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 SH3PXD2AQ5TCZ1 1133 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 CXorf57Q6NSI4 855 aaKnown RBP12.9□□□□□ -0.34
SMAD3-208ENST00000558827 SND1Q7KZF4 910 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMAD3-208ENST00000558827 TFAP2DQ7Z6R9 452 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 FAM131BQ86XD5 332 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 DNAAF5Q86Y56 855 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 DEFB124Q8NES8 71 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 JOSD2Q8TAC2 188 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 NUP58Q9BVL2 599 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 MPP6Q9NZW5 540 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 SERGEFQ9UGK8 458 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms