RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 NDST1P52848 882 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 C1QBPQ07021 282 aaKnown RBP12.35□□□□□ -0.43
SMAD3-206ENST00000558739 ZNF177Q13360 481 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-206ENST00000558739 MPPE1Q53F39 396 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 HS1BP3Q53T59 392 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 PERM1Q5SV97 790 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 XKR5Q6UX68 686 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 MMS22LQ6ZRQ5 1243 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 EFL1Q7Z2Z2 1120 aaKnown RBP12.35□□□□□ -0.43
SMAD3-206ENST00000558739 CCDC186Q7Z3E2 898 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 B3GNT8Q7Z7M8 397 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 IQCHQ86VS3 1027 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 SLC22A18ASQ8N1D0 253 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 STK40Q8N2I9 435 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 LIN37Q96GY3 246 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-206ENST00000558739 TNIP3Q96KP6 325 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 TWNKQ96RR1 684 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 DCLK3Q9C098 648 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 MARCH2Q9P0N8 246 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 SEL1LQ9UBV2 794 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 SUN2Q9UH99 717 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 INTS6Q9UL03 887 aaKnown RBP12.35□□□□□ -0.43
SMAD3-206ENST00000558739 PCDHA5Q9Y5H7 936 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 AGRPO00253 132 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 RNASEH1O60930 286 aaKnown RBP12.34□□□□□ -0.43
SMAD3-206ENST00000558739 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 POLR2EP19388 210 aaKnown RBP12.34□□□□□ -0.43
SMAD3-206ENST00000558739 CSKP41240 450 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 NEK4P51957 841 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 COG7P83436 770 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 KCNMA1Q12791 1236 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 SFSWAPQ12872 951 aaKnown RBP12.34□□□□□ -0.43
SMAD3-206ENST00000558739 SNRNP35Q16560 246 aaKnown RBP12.34□□□□□ -0.43
SMAD3-206ENST00000558739 ZNF699Q32M78 642 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 RFWD3Q6PCD5 774 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-206ENST00000558739 SND1Q7KZF4 910 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMAD3-206ENST00000558739 JAMLQ86YT9 394 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 TMEM145Q8NBT3 493 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 OR13H1Q8NG92 308 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 WDR36Q8NI36 951 aaKnown RBP12.34□□□□□ -0.43
SMAD3-206ENST00000558739 PLEKHO2Q8TD55 490 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 KLK6Q92876 244 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 MYEOVQ96EZ4 313 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 LMLNQ96KR4 655 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 NLGN3Q9NZ94 848 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 UNC13CQ8NB66 2214 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 UBE4BO95155 1302 aa12.34□□□□□ -0.43
SMAD3-206ENST00000558739 SPG11Q96JI7 2443 aa12.33□□□□□ -0.43
SMAD3-206ENST00000558739 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.44
SMAD3-206ENST00000558739 ATP5BP06576 529 aaKnown RBP12.33□□□□□ -0.44
SMAD3-206ENST00000558739 RALAP11233 206 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 SFTPCP11686 197 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 MZF1P28698 734 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-206ENST00000558739 CASRP41180 1078 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 RIPPLY3P57055 190 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 PDE4CQ08493 712 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 TRPC3Q13507 836 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 STAT4Q14765 748 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
SMAD3-206ENST00000558739 ZNF787Q6DD87 383 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 MCTP1Q6DN14 999 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 C14orf80Q86SX3 495 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 FAM184AQ8NB25 1140 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 NDRG1Q92597 394 aaKnown RBP12.33□□□□□ -0.44
SMAD3-206ENST00000558739 KLHDC7BQ96G42 594 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 AK8Q96MA6 479 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 CALN1Q9BXU9 219 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 OLFML3Q9NRN5 406 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 KLHL11Q9NVR0 708 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 CLIC5Q9NZA1 410 aa12.33□□□□□ -0.44
SMAD3-206ENST00000558739 CCDC187A0A096LP49 1063 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 GOLGA6L7A0A1B0GV03 622 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 A1L4Q6 167 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 MSI1O43347 362 aaKnown RBP12.32□□□□□ -0.44
SMAD3-206ENST00000558739 IL1BP01584 269 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 GAP43P17677 238 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 UQCRFS1P47985 274 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 STK19P49842 368 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-206ENST00000558739 INHBCP55103 352 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 CLDN2P57739 230 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 OVGP1Q12889 678 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 NCAPHQ15003 741 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 PSMD6Q15008 389 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 SURF1Q15526 300 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 TRIP4Q15650 581 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-206ENST00000558739 RILPL1Q5EBL4 403 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 AGBL4Q5VU57 503 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 TADA2BQ86TJ2 420 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 PRPF39Q86UA1 669 aaKnown RBP12.32□□□□□ -0.44
SMAD3-206ENST00000558739 ZNF276Q8N554 614 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 ZNF548Q8NEK5 533 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-206ENST00000558739 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-206ENST00000558739 TMA16Q96EY4 203 aaKnown RBP12.32□□□□□ -0.44
SMAD3-206ENST00000558739 EPSTI1Q96J88 318 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 SYNDIG1Q9H7V2 258 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 SLCO3A1Q9UIG8 710 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 SARDHQ9UL12 918 aa12.32□□□□□ -0.44
SMAD3-206ENST00000558739 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms