RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 HPS3Q969F9 1004 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 TTC17Q96AE7 1141 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 KLHDC7BQ96G42 594 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 VCPIP1Q96JH7 1222 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 TMX3Q96JJ7 454 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 HEXIM2Q96MH2 286 aaKnown RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 CLIC6Q96NY7 704 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 OSBPL2Q9H1P3 480 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 TNMDQ9H2S6 317 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 KDM4CQ9H3R0 1056 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 USP29Q9HBJ7 922 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 TFIP11Q9UBB9 837 aaKnown RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 SEPT3Q9UH03 358 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 STOML2Q9UJZ1 356 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 FBXO2Q9UK22 296 aaPredicted RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 DMTF1Q9Y222 760 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 HBS1LQ9Y450 684 aaKnown RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 PCDHB1Q9Y5F3 818 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 CLIC4Q9Y696 253 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 UBE4BO95155 1302 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 WDFY3Q8IZQ1 3526 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 SMG1Q96Q15 3661 aaKnown RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 SPTA1P02549 2419 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 MYO18BQ8IUG5 2567 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 EDDM13A0A1B0GTR0 161 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 TYW5A2RUC4 315 aaKnown RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 NEMP2A6NFY4 417 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 LRRIQ3A6PVS8 624 aaPredicted RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 IKBKBO14920 756 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 IRAK2O43187 625 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 TBL1XO60907 577 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 RNGTTO60942 597 aaKnown RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 CSO75390 466 aaKnown RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 MOCS3O95396 460 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 GJB6O95452 261 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 ZBED1O96006 694 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 ADH1BP00325 375 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 ASS1P00966 412 aaKnown RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 GP1BAP07359 652 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 SRPRAP08240 638 aaKnown RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 ALPPL2P10696 532 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 CKMT1AP12532 417 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 CD70P32970 193 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 SLC11A2P49281 568 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 EHHADHQ08426 723 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 INCA1Q0VD86 236 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 NFATC3Q12968 1075 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 ARID5BQ14865 1188 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 RABEP1Q15276 862 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 ARL13BQ3SXY8 428 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 ZACNQ401N2 412 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 C9orf64Q5T6V5 341 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 PPP1R26Q5T8A7 1209 aaPredicted RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 KIAA1614Q5VZ46 1190 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 PM20D1Q6GTS8 502 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 IGF2-ASQ6U949 168 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 UNC13DQ70J99 1090 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 TMC6Q7Z403 805 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 SPATS2Q86XZ4 545 aaKnown RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 UNC45BQ8IWX7 931 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 SLC25A45Q8N413 288 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 TTC39CQ8N584 583 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 PDILTQ8N807 584 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 CCDC150Q8NCX0 1101 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 OR4C6Q8NH72 309 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 TPCN2Q8NHX9 752 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 FIBINQ8TAL6 211 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 ELMO3Q96BJ8 720 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 SLC46A1Q96NT5 459 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 FAM129BQ96TA1 746 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 C7orf25Q9BPX7 421 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 DDX50Q9BQ39 737 aaKnown RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 ARHGAP9Q9BRR9 750 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 DUSP23Q9BVJ7 150 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 IMPG2Q9BZV3 1241 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 GZF1Q9H116 711 aaPredicted RBP5.38□□□□□ -1.55
SPG11-208ENST00000558155 CUEDC2Q9H467 287 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 MTG2Q9H4K7 406 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 KLHL11Q9NVR0 708 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 KBTBD4Q9NVX7 518 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 STIM2Q9P246 746 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 HMGXB4Q9UGU5 601 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 DACH1Q9UI36 760 aa5.38□□□□□ -1.55
SPG11-208ENST00000558155 DOCK9Q9BZ29 2069 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 FAM187AA6NFU0 413 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 C10orf142B7Z368 130 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 PRAMEF26H0Y7S4 382 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SLC7A4O43246 635 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 LATO43561 262 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 SDC3O75056 442 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 S1PR4O95977 384 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 IL1BP01584 269 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 HLA-DRAP01903 254 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 PDCP20941 246 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 DGKAP23743 735 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 MAT2AP31153 395 aaKnown RBP5.37□□□□□ -1.55
SPG11-208ENST00000558155 CSKP41240 450 aa5.37□□□□□ -1.55
SPG11-208ENST00000558155 PIK3CAP42336 1068 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms