RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CYP3A4P08684 503 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 IGFBP2P18065 325 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 CDC25AP30304 524 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 RCAN1P53805 252 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 FOXL2P58012 376 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 AP2B1P63010 937 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 CHAF1AQ13111 956 aaPredicted RBP3.77□□□□□ -1.81
SPG11-206ENST00000558093 TRIM14Q14142 442 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 ALG10Q5BKT4 473 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 ALG10BQ5I7T1 473 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 NFRKBQ6P4R8 1299 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 RINLQ6ZS11 566 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 SLC44A2Q8IWA5 706 aaPredicted RBP3.77□□□□□ -1.81
SPG11-206ENST00000558093 SAMD3Q8N6K7 520 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 CLEC4CQ8WTT0 213 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 RSC1A1Q92681 617 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 VCPIP1Q96JH7 1222 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 EBF3Q9H4W6 596 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 SEPSECSQ9HD40 501 aaKnown RBP3.77□□□□□ -1.81
SPG11-206ENST00000558093 ZBTB40Q9NUA8 1239 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 BAG5Q9UL15 447 aa3.77□□□□□ -1.81
SPG11-206ENST00000558093 C19orf53Q9UNZ5 99 aaPredicted RBP3.77□□□□□ -1.81
SPG11-206ENST00000558093 LMTK3Q96Q04 1460 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 CYP3A7-CYP3A51PA0A087WV96 503 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 FAM90A18PA6NE21 464 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 FAM90A16PA6NEW6 464 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 FAM90A9PA6NNJ1 464 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 FAM90A5PA8MXJ8 464 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 INSIG1O15503 277 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 NTN1O95631 604 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 CSTBP04080 98 aaKnown RBP3.76□□□□□ -1.81
SPG11-206ENST00000558093 FAM90A15PP0C7V4 464 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 FAM90A14PP0C7W9 464 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 CHRNB1P11230 501 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 CYP3A7P24462 503 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 SERPINA4P29622 427 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 SERPINF1P36955 418 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 STAT1P42224 750 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 PMPCAQ10713 525 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 OS9Q13438 667 aaPredicted RBP3.76□□□□□ -1.81
SPG11-206ENST00000558093 PTGR1Q14914 329 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 TBRG1Q3YBR2 411 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 CCDC38Q502W7 563 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 KIAA1755Q5JYT7 1200 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 TTC39AQ5SRH9 613 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 SULT6B1Q6IMI4 303 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 HMBOX1Q6NT76 420 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 ERAP2Q6P179 960 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 LVRNQ6Q4G3 990 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 SYNE3Q6ZMZ3 975 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 ANKS1BQ7Z6G8 1248 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 KLBQ86Z14 1044 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 SPICE1Q8N0Z3 855 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 LPAR1Q92633 364 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 EID2BQ96D98 161 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 WDR83Q9BRX9 315 aaKnown RBP3.76□□□□□ -1.81
SPG11-206ENST00000558093 WACQ9BTA9 647 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 MLXIPQ9HAP2 919 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 FZD3Q9NPG1 666 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 NDUFAF4Q9P032 175 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 TAGLN3Q9UI15 199 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 FBXO4Q9UKT5 387 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 DAPP1Q9UN19 280 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 PCDHA12Q9UN75 941 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 PCDHA10Q9Y5I2 948 aa3.76□□□□□ -1.81
SPG11-206ENST00000558093 TTC3P53804 2025 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 A0A0G2JK05 382 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 HMX3A6NHT5 357 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 A6NNC1 897 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 ZNF814B7Z6K7 855 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 MCIDASD6RGH6 385 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 EPN2O95208 641 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 TBXAS1P24557 533 aaPredicted RBP3.75□□□□□ -1.81
SPG11-206ENST00000558093 CHRNA5P30532 468 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 KCNJ4P48050 445 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 GALNT1Q10472 559 aaPredicted RBP3.75□□□□□ -1.81
SPG11-206ENST00000558093 GPR162Q16538 588 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 LEXMQ3ZCV2 418 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 TRIM60Q495X7 471 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 PIK3CD-AS1Q5SR53 167 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 ZNF549Q6P9A3 640 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 MDGA2Q7Z553 956 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 CCDC25Q86WR0 208 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 ENDOVQ8N8Q3 282 aaKnown RBP3.75□□□□□ -1.81
SPG11-206ENST00000558093 C9orf106Q8NAJ2 232 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 OR1N1Q8NGS0 311 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 IP6K1Q92551 441 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 RUBCNQ92622 972 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 ATP2A3Q93084 1043 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 TASP1Q9H6P5 420 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 PDE11AQ9HCR9 933 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 ARL15Q9NXU5 204 aa3.75□□□□□ -1.81
SPG11-206ENST00000558093 FOXO6A8MYZ6 492 aa3.74□□□□□ -1.81
SPG11-206ENST00000558093 H0YGN5 161 aa3.74□□□□□ -1.81
SPG11-206ENST00000558093 IKBKBO14920 756 aa3.74□□□□□ -1.81
SPG11-206ENST00000558093 HEXIM1O94992 359 aaKnown RBP3.74□□□□□ -1.81
SPG11-206ENST00000558093 TOMM40O96008 361 aa3.74□□□□□ -1.81
SPG11-206ENST00000558093 WNT1P04628 370 aa3.74□□□□□ -1.81
SPG11-206ENST00000558093 TNFRSF1BP20333 461 aa3.74□□□□□ -1.81
SPG11-206ENST00000558093 GSTM2P28161 218 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms