RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 RANBP10Q6VN20 620 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 GSTA5Q7RTV2 222 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 GPBP1Q86WP2 473 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 CATSPER3Q86XQ3 398 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 TAGAPQ8N103 731 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 MAGEB6Q8N7X4 407 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 IPCEF1Q8WWN9 437 aaPredicted RBP11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 OSBPL11Q9BXB4 747 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 HMG20AQ9NP66 347 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 ZNF221Q9UK13 617 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 DTX4Q9Y2E6 619 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 MRPS7Q9Y2R9 242 aaKnown RBP11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 TANC1Q9C0D5 1861 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 A0A087WXM4 84 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 MAN1A2O60476 641 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 ZNF623O75123 536 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 KCNH1O95259 989 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 ZNF26P17031 533 aaPredicted RBP11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 STYK1Q6J9G0 422 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 TMEM65Q6PI78 240 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 ATG14Q6ZNE5 492 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 DPP9Q86TI2 863 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 TMEM35BQ8NCS4 154 aa11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 VANGL1Q8TAA9 524 aaPredicted RBP11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 FAM217BQ9NTX9 383 aaPredicted RBP11.28□□□□□ -0.6
SEMA4B-204ENST00000558065 PLOD2O00469 737 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 KPNA5O15131 536 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 ADAMTS4O75173 837 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 ADRA1DP25100 572 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 LRPAP1P30533 357 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 UQCRC1P31930 480 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 PRKAA2P54646 552 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 TCHHL1Q5QJ38 904 aaPredicted RBP11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 FAM180BQ6P0A1 224 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 WDR70Q9NW82 654 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 GMPPBQ9Y5P6 360 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 NRKQ7Z2Y5 1582 aa11.27□□□□□ -0.6
SEMA4B-204ENST00000558065 IGSF1Q8N6C5 1336 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 LINC00587B1AMM8 73 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 SSX5O60225 188 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 SPAG6O75602 509 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 CALB1P05937 261 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 KRT13P13646 458 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 PSMA4P25789 261 aaKnown RBP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 EPHA3P29320 983 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 CHRNA3P32297 505 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 SCNN1GP51170 649 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 ZMYND11Q15326 602 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 BRMS1LQ5PSV4 323 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 TTC39BQ5VTQ0 682 aaPredicted RBP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 KSR2Q6VAB6 950 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 KIAA0408Q6ZU52 694 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 PIK3AP1Q6ZUJ8 805 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 PRPF39Q86UA1 669 aaKnown RBP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 MFSD4AQ8N468 514 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 TRPM4Q8TD43 1214 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 CIDECQ96AQ7 238 aaPredicted RBP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 MAGED4Q96JG8 741 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 ZFYVE19Q96K21 471 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 APOL5Q9BWW9 433 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 BCL2L14Q9BZR8 327 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 RPRD1BQ9NQG5 326 aaKnown RBP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 SEPT11Q9NVA2 429 aaKnown RBP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 PIH1D1Q9NWS0 290 aaKnown RBP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 ZNF229Q9UJW7 825 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 ZNF532Q9HCE3 1301 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 FAM237BA0A1B0GVD1 139 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 PRR5-ARHGAP8B1AHC4 643 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 KCNQ3O43525 872 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 POP4O95707 220 aaKnown RBP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 CPB1P15086 417 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 TTKP33981 857 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 CCR10P46092 362 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 RGS7P49802 495 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 SNX16P57768 344 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 ARHGAP8P85298 464 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 FAM214AQ32MH5 1076 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 ARMC4Q5T2S8 1044 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 ERMP1Q7Z2K6 904 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 GTF2H4Q92759 462 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 P2RX5Q93086 422 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 TRAF4Q9BUZ4 470 aaPredicted RBP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 TSSK1BQ9BXA7 367 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 CNNM1Q9NRU3 951 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 TSR3Q9UJK0 312 aaKnown RBP11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 POLIQ9UNA4 740 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 PCDHAC2Q9Y5I4 1007 aa11.27□□□□□ -0.61
SEMA4B-204ENST00000558065 E5RJQ4 531 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 RAD51BO15315 384 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 MMP8P22894 467 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 CCNE1P24864 410 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 ST13P50502 369 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 KRT17Q04695 432 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 SSRP1Q08945 709 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 SLC13A2Q13183 592 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 PKN2Q16513 984 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 CACHD1Q5VU97 1274 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms