RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PLEKHO2Q8TD55 490 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 UCMAQ8WVF2 138 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 IGSF8Q969P0 613 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 JAKMIP2Q96AA8 810 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 NXPE2Q96DL1 559 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 NAP1L5Q96NT1 182 aaPredicted RBP6.13□□□□□ -1.43
VPS33B-207ENST00000557470 PCED1AQ9H1Q7 454 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 TM9SF3Q9HD45 589 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 FAM49BQ9NUQ9 324 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS33B-207ENST00000557470 ELOVL2Q9NXB9 296 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 FTSJ1Q9UET6 329 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 SCML2Q9UQR0 700 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 RAI2Q9Y5P3 530 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 MUC22E2RYF6 1773 aaPredicted RBP6.13□□□□□ -1.43
VPS33B-207ENST00000557470 CKAP5Q14008 2032 aa6.13□□□□□ -1.43
VPS33B-207ENST00000557470 MYO18BQ8IUG5 2567 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 VPS37CA5D8V6 355 aaPredicted RBP6.12□□□□□ -1.43
VPS33B-207ENST00000557470 CYSRT1A8MQ03 144 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 E9PAM4 449 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 CBX4O00257 560 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 VNN1O95497 513 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 SEMA4FO95754 770 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 HMBSP08397 361 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 FAM200BP0CF97 657 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 CORO1AP31146 461 aaKnown RBP6.12□□□□□ -1.43
VPS33B-207ENST00000557470 EIF2S3P41091 472 aaKnown RBP6.12□□□□□ -1.43
VPS33B-207ENST00000557470 CTSKP43235 329 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 PLA2G4AP47712 749 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 NASPP49321 788 aaPredicted RBP6.12□□□□□ -1.43
VPS33B-207ENST00000557470 NDST1P52848 882 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 ASIC1P78348 528 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 CAMK2GQ13555 558 aaPredicted RBP6.12□□□□□ -1.43
VPS33B-207ENST00000557470 UBAP2LQ14157 1087 aaKnown RBP6.12□□□□□ -1.43
VPS33B-207ENST00000557470 EIF4HQ15056 248 aaKnown RBP6.12□□□□□ -1.43
VPS33B-207ENST00000557470 TLR1Q15399 786 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 TEAD4Q15561 434 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 BMT2Q1RMZ1 405 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 FAM173BQ6P4H8 233 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 SERPINA13PQ6UXR4 307 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 SCD5Q86SK9 330 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 TMPRSS12Q86WS5 348 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 GATAD2AQ86YP4 633 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 CRYBG2Q8N1P7 616 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 ZNF366Q8N895 744 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 XXYLT1Q8NBI6 393 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 ENGASEQ8NFI3 743 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 OR2T3Q8NH03 318 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 ZNF507Q8TCN5 953 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 TMEM131Q92545 1883 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 BIRC7Q96CA5 298 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 FCRL3Q96P31 734 aaPredicted RBP6.12□□□□□ -1.43
VPS33B-207ENST00000557470 TWNKQ96RR1 684 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 DNAJC7Q99615 494 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 ORAI3Q9BRQ5 295 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 CIPCQ9C0C6 399 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 LHX5Q9H2C1 402 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 TNMDQ9H2S6 317 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 RUBCNLQ9H714 662 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 OSGEPQ9NPF4 335 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 ZNF358Q9NW07 568 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 SFMBT1Q9UHJ3 866 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 NAGPAQ9UK23 515 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 AGO1Q9UL18 857 aaKnown RBP6.12□□□□□ -1.43
VPS33B-207ENST00000557470 STRIP2Q9ULQ0 834 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 PCDHA5Q9Y5H7 936 aa6.12□□□□□ -1.43
VPS33B-207ENST00000557470 SHROOM3Q8TF72 1996 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 UBE4BO95155 1302 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 A0A1B0GTH6 734 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 A0A1B0GTQ1 180 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 LRRIQ3A6PVS8 624 aaPredicted RBP6.11□□□□□ -1.43
VPS33B-207ENST00000557470 TSPAN3O60637 253 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 EXOC3O60645 756 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 RFPL3O75679 317 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 FSBPO95073 299 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 C4BPAP04003 597 aaKnown RBP6.11□□□□□ -1.43
VPS33B-207ENST00000557470 JUPP14923 745 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 CD27P26842 260 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 MSX1P28360 303 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 HNF1BP35680 557 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 CHKAP35790 457 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 ASPAP45381 313 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 KIF11P52732 1056 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 BCAT1P54687 386 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 GDF10P55107 478 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 EFEMP1Q12805 493 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 DNAJC3Q13217 504 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 BRD3Q15059 726 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 INAVAQ3KP66 663 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 FNDC3BQ53EP0 1204 aaKnown RBP6.11□□□□□ -1.43
VPS33B-207ENST00000557470 FAM26FQ5R3K3 315 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 PRAMEF14Q5SWL7 426 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 SPOPLQ6IQ16 392 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 PPP4R4Q6NUP7 873 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 PCSK4Q6UW60 755 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 LRRC69Q6ZNQ3 347 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 CCDC186Q7Z3E2 898 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 ADAT2Q7Z6V5 191 aaKnown RBP6.11□□□□□ -1.43
VPS33B-207ENST00000557470 ZNF605Q86T29 641 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 TADA2BQ86TJ2 420 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms