RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 OLIG1Q8TAK6 271 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 RLN3Q8WXF3 142 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 BAP1Q92560 729 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 TTC17Q96AE7 1141 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 PCDHB18PQ96TA0 734 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 PRMT1Q99873 361 aaKnown RBP14.24□□□□□ -0.13
VPS33B-206ENST00000557358 DUSP15Q9H1R2 295 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-206ENST00000557358 ARRDC1-AS1Q9H2J1 176 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 VPS45Q9NRW7 570 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 IFNKQ9P0W0 207 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 SLC25A13Q9UJS0 675 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 HCN2Q9UL51 889 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 LUC7L2Q9Y383 392 aaKnown RBP14.24□□□□□ -0.13
VPS33B-206ENST00000557358 ADCY5O95622 1261 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 RHOCP08134 193 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 CHRM1P11229 460 aaPredicted RBP14.23□□□□□ -0.13
VPS33B-206ENST00000557358 GZMAP12544 262 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 PRKCHP24723 683 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 HOXC13P31276 330 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 MPLP40238 635 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 PRKCIP41743 596 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 KRT83P78385 493 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 ZBED6P86452 979 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 TRIM14Q14142 442 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 PLEKHG6Q3KR16 790 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 AASDHQ4L235 1098 aaPredicted RBP14.23□□□□□ -0.13
VPS33B-206ENST00000557358 SYCP2LQ5T4T6 812 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 C6orf118Q5T5N4 469 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 TMEM215Q68D42 235 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 RABEPKQ7Z6M1 372 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 METTL3Q86U44 580 aaKnown RBP14.23□□□□□ -0.13
VPS33B-206ENST00000557358 FAM131BQ86XD5 332 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 EMC1Q8N766 993 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 WFDC5Q8TCV5 224 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 SYN2Q92777 582 aaPredicted RBP14.23□□□□□ -0.13
VPS33B-206ENST00000557358 P2RY11Q96G91 374 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 MRGPRX1Q96LB2 322 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.23□□□□□ -0.13
VPS33B-206ENST00000557358 MUC3BQ9H195 1237 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 HAUS4Q9H6D7 363 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 SEMA4GQ9NTN9 838 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 PARVAQ9NVD7 372 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 VPS28Q9UK41 221 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 CDV3Q9UKY7 258 aaKnown RBP14.23□□□□□ -0.13
VPS33B-206ENST00000557358 CYP8B1Q9UNU6 501 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 MYO15AQ9UKN7 3530 aa14.23□□□□□ -0.13
VPS33B-206ENST00000557358 C2CD4BA6NLJ0 364 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 TMCO5BA8MYB1 307 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 SRGAP2O75044 1071 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 DNTTP04053 509 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 MYBL1P10243 752 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 ZBTB16Q05516 673 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 CAMK2GQ13555 558 aaPredicted RBP14.22□□□□□ -0.13
VPS33B-206ENST00000557358 MAP7D1Q3KQU3 841 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 LYSMD4Q5XG99 296 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 MON1BQ7L1V2 547 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 SETD3Q86TU7 594 aaPredicted RBP14.22□□□□□ -0.13
VPS33B-206ENST00000557358 MCOLN2Q8IZK6 566 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 FAM172AQ8WUF8 416 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 CPLX3Q8WVH0 158 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 FOXJ1Q92949 421 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 ERLEC1Q96DZ1 483 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 NCAPGQ9BPX3 1015 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 C2orf49Q9BVC5 232 aaPredicted RBP14.22□□□□□ -0.13
VPS33B-206ENST00000557358 TMEM245Q9H330 911 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 RETREG1Q9H6L5 497 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 MRPL47Q9HD33 250 aaKnown RBP14.22□□□□□ -0.13
VPS33B-206ENST00000557358 ZNHIT6Q9NWK9 470 aaKnown RBP14.22□□□□□ -0.13
VPS33B-206ENST00000557358 SCML1Q9UN30 329 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 ERVW-1Q9UQF0 538 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 NCKAP1Q9Y2A7 1128 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
VPS33B-206ENST00000557358 SCINQ9Y6U3 715 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 USP34Q70CQ2 3546 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 CKAP5Q14008 2032 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 GON4LQ3T8J9 2241 aa14.22□□□□□ -0.13
VPS33B-206ENST00000557358 PLXND1Q9Y4D7 1925 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 EDDM13A0A1B0GTR0 161 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 TARSL2A2RTX5 802 aaKnown RBP14.21□□□□□ -0.13
VPS33B-206ENST00000557358 E9PAM4 449 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 KHNYNO15037 678 aaKnown RBP14.21□□□□□ -0.13
VPS33B-206ENST00000557358 RTN2O75298 545 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 ENDOD1O94919 500 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 ZNF806P0C7X5 589 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 HLA-EP13747 358 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 TFE3P19532 575 aaPredicted RBP14.21□□□□□ -0.13
VPS33B-206ENST00000557358 CD6P30203 668 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 OR1E1P30953 314 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 RFC1P35251 1148 aaPredicted RBP14.21□□□□□ -0.13
VPS33B-206ENST00000557358 ETFBP38117 255 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 ZNF143P52747 638 aaPredicted RBP14.21□□□□□ -0.13
VPS33B-206ENST00000557358 PLK1P53350 603 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 AIF1P55008 147 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 C15orf59Q2T9L4 293 aaPredicted RBP14.21□□□□□ -0.13
VPS33B-206ENST00000557358 CCDC14Q49A88 953 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 C5orf22Q49AR2 442 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 FSCBQ5H9T9 825 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 EFHC2Q5JST6 749 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 ZNF776Q68DI1 518 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms