RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 WFIKKN2Q8TEU8 576 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 PLD4Q96BZ4 506 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 GPR174Q9BXC1 333 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 ZMYND15Q9H091 742 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 APOBEC3GQ9HC16 384 aaKnown RBP9.06□□□□□ -0.96
VRK1-206ENST00000557222 OLA1Q9NTK5 396 aaKnown RBP9.06□□□□□ -0.96
VRK1-206ENST00000557222 PLK2Q9NYY3 685 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 STOML2Q9UJZ1 356 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 AGO1Q9UL18 857 aaKnown RBP9.06□□□□□ -0.96
VRK1-206ENST00000557222 NOVA2Q9UNW9 492 aaKnown RBP9.06□□□□□ -0.96
VRK1-206ENST00000557222 CKAP5Q14008 2032 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 KCNJ18B7U540 433 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 TGFBR3LH3BV60 316 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 MDM4O15151 490 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 FLRT2O43155 660 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 STX10O60499 249 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 RHOBTB3O94955 611 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 NR2F2P24468 414 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 MAOBP27338 520 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 GCLMP48507 274 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 AFF3P51826 1226 aaKnown RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 COPAP53621 1224 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 PPP3CAQ08209 521 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 SCAPQ12770 1279 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 EFEMP1Q12805 493 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 CAMK2GQ13555 558 aaPredicted RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 COL9A2Q14055 689 aaPredicted RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 ZNF234Q14588 700 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 TRIP4Q15650 581 aaPredicted RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 MPPE1Q53F39 396 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 DCAF12L1Q5VU92 463 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 KRT39Q6A163 491 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 TMPRSS7Q7RTY8 843 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 FAM186BQ8IYM0 893 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 GRAMD1CQ8IYS0 662 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 SCML4Q8N228 414 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 GUF1Q8N442 669 aaKnown RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 ZNF557Q8N988 423 aaPredicted RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 ANKRD52Q8NB46 1076 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 OR2I1PQ8NGU4 316 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 OR2T3Q8NH03 318 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 BAHD1Q8TBE0 780 aaPredicted RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 TAS1R2Q8TE23 839 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 ELMO3Q96BJ8 720 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 P2RY11Q96G91 374 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 TMEM176AQ96HP8 235 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 HEXIM2Q96MH2 286 aaKnown RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 CAMK1GQ96NX5 476 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 SPOCK3Q9BQ16 436 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 SLC6A17Q9H1V8 727 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 CCDC86Q9H6F5 360 aaKnown RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 GAREM1Q9H706 876 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 CD93Q9NPY3 652 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 TM7SF3Q9NS93 570 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 MARCH2Q9P0N8 246 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 DMGDHQ9UI17 866 aaKnown RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 RASAL2Q9UJF2 1139 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 NUDT5Q9UKK9 219 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 PLA2G4CQ9UP65 541 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 HBS1LQ9Y450 684 aaKnown RBP9.05□□□□□ -0.96
VRK1-206ENST00000557222 LOC400499M0QZD8 3231 aa9.05□□□□□ -0.96
VRK1-206ENST00000557222 HELZ2Q9BYK8 2649 aaKnown RBP9.04□□□□□ -0.96
VRK1-206ENST00000557222 FAM237AA0A1B0GTK4 181 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 E9PAM4 449 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 DFNA5O60443 496 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 ZBED1O96006 694 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 EPHX1P07099 455 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 CD58P19256 250 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 HARS2P49590 506 aaKnown RBP9.04□□□□□ -0.96
VRK1-206ENST00000557222 YWHAGP61981 247 aaKnown RBP eCLIP9.04□□□□□ -0.96
VRK1-206ENST00000557222 ARID5AQ03989 594 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 ADAM9Q13443 819 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 HLA-BQ31612 363 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 EDRF1Q3B7T1 1238 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 MPP7Q5T2T1 576 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 SERPINA13PQ6UXR4 307 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 RSRC2Q7L4I2 434 aaKnown RBP9.04□□□□□ -0.96
VRK1-206ENST00000557222 KIAA0907Q7Z7F0 614 aaPredicted RBP9.04□□□□□ -0.96
VRK1-206ENST00000557222 SLCO6A1Q86UG4 719 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 DENND1CQ8IV53 801 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 GALNT15Q8N3T1 639 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 ZCCHC9Q8N567 271 aaKnown RBP9.04□□□□□ -0.96
VRK1-206ENST00000557222 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.04□□□□□ -0.96
VRK1-206ENST00000557222 SLC4A11Q8NBS3 891 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 ENGASEQ8NFI3 743 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 SETD7Q8WTS6 366 aaKnown RBP9.04□□□□□ -0.96
VRK1-206ENST00000557222 DDI1Q8WTU0 396 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 GOLGA1Q92805 767 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 BHMTQ93088 406 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 JAKMIP2Q96AA8 810 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 MIR1-1HGQ9H1L0 117 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 TMEM245Q9H330 911 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 NOP53Q9NZM5 478 aaKnown RBP9.04□□□□□ -0.96
VRK1-206ENST00000557222 SCML1Q9UN30 329 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 HPSEQ9Y251 543 aa9.04□□□□□ -0.96
VRK1-206ENST00000557222 GCN1Q92616 2671 aaKnown RBP9.04□□□□□ -0.96
VRK1-206ENST00000557222 CELSR3Q9NYQ7 3312 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 SLC12A8A0AV02 714 aa9.03□□□□□ -0.96
VRK1-206ENST00000557222 XPO1O14980 1071 aaKnown RBP9.03□□□□□ -0.96
VRK1-206ENST00000557222 PAPSS1O43252 624 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms