RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 RFKQ969G6 155 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 GSDMAQ96QA5 445 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 SARGQ9BW04 601 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 TMEM60Q9H2L4 133 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 FAM204AQ9H8W3 233 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 ANKZF1Q9H8Y5 726 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 KLC4Q9NSK0 619 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 RMND1Q9NWS8 449 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 AATFQ9NY61 560 aaKnown RBP eCLIP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 VPS18Q9P253 973 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 XPR1Q9UBH6 696 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 ADD3Q9UEY8 706 aaKnown RBP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 L1RE1Q9UN81 338 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 MED16Q9Y2X0 877 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 SPATA31A5Q5VU36 1347 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 SPATA31A7Q8IWB4 1347 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 SYNRGQ9UMZ2 1314 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 COL4A1P02462 1669 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 DDX60Q8IY21 1712 aaKnown RBP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 ARAP2Q8WZ64 1704 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 ERICH2A1L162 156 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 TARSL2A2RTX5 802 aaKnown RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 WIPF3A6NGB9 483 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 SNAP23O00161 211 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 IFIT3O14879 490 aaKnown RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 DCLK1O15075 740 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 POLR2DO15514 142 aaKnown RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 PHGDHO43175 533 aaKnown RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 PDE8BO95263 885 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 PDHA1P08559 390 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 MYH3P11055 1940 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 ZNF37AP17032 561 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 PCSK6P29122 969 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 SLC7A1P30825 629 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 PBX1P40424 430 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 CRKLP46109 303 aaKnown RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 SLC11A2P49281 568 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 AARSP49588 968 aaKnown RBP eCLIP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 PROK1P58294 105 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 RHBDL3P58872 404 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 C1QTNF8P60827 252 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 AKAP17AQ02040 695 aaKnown RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 TUBB8Q3ZCM7 444 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 ZNF783Q6ZMS7 281 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 CCDC149Q6ZUS6 474 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 MICU3Q86XE3 530 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 TBC1D10CQ8IV04 446 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 FOXP4Q8IVH2 680 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 DIS3L2Q8IYB7 885 aaKnown RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 MPP5Q8N3R9 675 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 SLC15A4Q8N697 577 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 FAM156AQ8NDB6 213 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 RTL9Q8NET4 1388 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 OR6B3Q8NGW1 331 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 IL31RAQ8NI17 732 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 FAM136AQ96C01 138 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 HEPHQ9BQS7 1158 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 DESI2Q9BSY9 194 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 SPATA5L1Q9BVQ7 753 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 SLC26A6Q9BXS9 759 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 TRIM54Q9BYV2 358 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 RNF41Q9H4P4 317 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 YY1AP1Q9H869 796 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 MRPL44Q9H9J2 332 aaKnown RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 LY9Q9HBG7 655 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 KIAA1586Q9HCI6 787 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 PDE11AQ9HCR9 933 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 LZTFL1Q9NQ48 299 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 CHST12Q9NRB3 414 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 LIMA1Q9UHB6 759 aaKnown RBP5.1□□□□□ -1.59
ATXN3-246ENST00000557030 RSPH14Q9UHP6 348 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 TMX2Q9Y320 296 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 TNFRSF18Q9Y5U5 241 aa5.1□□□□□ -1.59
ATXN3-246ENST00000557030 MYH14Q7Z406 1995 aaKnown RBP5.09□□□□□ -1.59
ATXN3-246ENST00000557030 MYH7P12883 1935 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 MYO5AQ9Y4I1 1855 aaKnown RBP5.09□□□□□ -1.59
ATXN3-246ENST00000557030 MROH5Q6ZUA9 1318 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 TMEM233B4DJY2 109 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 RANBP6O60518 1105 aaKnown RBP5.09□□□□□ -1.59
ATXN3-246ENST00000557030 NTSR2O95665 410 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 C1RP00736 705 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 PXNP49023 591 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-246ENST00000557030 LOXL3P58215 753 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 KRT83P78385 493 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 GOLGA8FQ08AF8 430 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 GOLGA8DPQ0D2H9 430 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 CUL4BQ13620 913 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 CASP8Q14790 479 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 TTC31Q49AM3 519 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-246ENST00000557030 SLC9C2Q5TAH2 1124 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 RAD9BQ6WBX8 426 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 GBP6Q6ZN66 633 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 CYB5R4Q7L1T6 521 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 GRASPQ7Z6J2 395 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-246ENST00000557030 EFCAB13Q8IY85 973 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 C10orf67Q8IYJ2 551 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 KIAA0319LQ8IZA0 1049 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 SLC35F6Q8N357 371 aa5.09□□□□□ -1.59
ATXN3-246ENST00000557030 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms